| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0693 |
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| Symbol | |
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| ID | 4927846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 668880 |
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| End bp | 670067 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640166195 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001097219 |
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| Protein GI | 134045733 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0712051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTAC TCTCCATTTT TGAAACAAAG GAACCAAAAA AATTGTTTGG AAAAGGCATG
GAATATTATA ATAGGGGCAA ATATCAAAAA GCAATAGAAT TATTTAATAA AACCATCAAT
TCTGAACCAA ATAATCCTCA TGCATGGTAT TTCAAAGGAC ATGCCTACCA AATGCTTGAT
AAACCAAAAT TAGCTCAGGA CTCCTACGAA AAAGCTTTAT CAATAAGTCC AAATGATCTT
GAAATGGTAA AAAATTATGC AATGTTGTTA AATTCTTTGG AATTGTTTAA TGAATCTGTT
GAAGTTTTAA AGGATGTTTC CGAACCAGAT TTTGAAATTA CTGAAATTTT AGGCAATGCT
TACTTAAAAA TGGGTAAATT TGATGAAGCT CTTGTGGAAT TCGATAAAAT TTTAGAAAAA
AAGCCGAAAT ATAAGGAAGT ACTTGCAAAA AAAGGAACTG TACTTGTGGG ACTTAAAAAA
TTTGATGAAG CTCTTGATAT TTATGAAAAA GTTTTGAAAA TAAGTCCATA TGATACAGAA
GTATGGAAAA ATATAGGTAA TGCATTTTAT ACTGTCAAAA AGTATGAAAA GGCAATTCAA
TTTTACGATA TGTATTTGAC TGAACATAAA GGCGACTTTG AAGTAACCCT ATCAAAGGGC
GATGCTTTTA GAAAACTTGG AAAAACTAAT GAAGCTCTTG ATCTTTATAC AAAAGTACTT
GAAAAACATA TGAACAGCCA CGAACCTTGG TGTAGGGTTG GACTCCTGTA TTATGATAAT
AAAGATTATG AAACTGCCAC TTATTATTTA GAACTTGCAA GTGAAAGGAA CCCATTAAAT
CCATCCATAC TTATAAAACT TGCTCGAACA TATATTAGAC TGAAAAATTA TAATAAAAGC
CTCGAATTTA TTGAAAAAGC ACTGGATAAA GATAACGAAT ATGCAAAAGC ATGGTGCTAC
AAAGGACAGG TTTTAGACAT TTTAGAAAGA CATTACGAAG CAATAGACTG CTACAAAAAA
GCAATAAATC TGAATAAAAA TGTTTCAGAC TTTTGGATAC AGCTTTCTAA AGTCTATGGT
ACTGTTGGAA AAAAAGAAGA TTCGAAATAT GCTTATGAAA CTGCAATTAA ACTTGAACCT
GAAATTGCCC TTTTTGAAAA AAATGTGCAA AATTCAAACT TTTTGTAG
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| Protein sequence | MGLLSIFETK EPKKLFGKGM EYYNRGKYQK AIELFNKTIN SEPNNPHAWY FKGHAYQMLD
KPKLAQDSYE KALSISPNDL EMVKNYAMLL NSLELFNESV EVLKDVSEPD FEITEILGNA
YLKMGKFDEA LVEFDKILEK KPKYKEVLAK KGTVLVGLKK FDEALDIYEK VLKISPYDTE
VWKNIGNAFY TVKKYEKAIQ FYDMYLTEHK GDFEVTLSKG DAFRKLGKTN EALDLYTKVL
EKHMNSHEPW CRVGLLYYDN KDYETATYYL ELASERNPLN PSILIKLART YIRLKNYNKS
LEFIEKALDK DNEYAKAWCY KGQVLDILER HYEAIDCYKK AINLNKNVSD FWIQLSKVYG
TVGKKEDSKY AYETAIKLEP EIALFEKNVQ NSNFL
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