| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0612 |
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| Symbol | |
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| ID | 4927922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 577422 |
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| End bp | 577946 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640166114 |
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| Product | transcription factor |
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| Protein accession | YP_001097139 |
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| Protein GI | 134045653 |
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| COG category | [K] Transcription |
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| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.298266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC CAGAAATTAA TATTGTAAAT GTTGTGGGGT CATGTGATCT TAAAACTCCA
ATGAATTTGG AAAAAATTTA TCCTTTGATC GAAAATTCTG AGTATGATCC TGAAAGGTAT
CACTGTATTT ATATACGAAC TCCCGGAATT AAAAGACTTG TTACAATATT TAAATCTGGA
AAATTAAATA CCGCAGGTTC CAAATCGATC GAAGAAGCTA AATCCGCAGT TTTGGAAATT
GTGGATAAAT TAAATGAATT GGGTTTTACT GATAAAAGAC CAGAAGTTAA AATTTACAAT
ATTGTTGCGA ATATATCTTT TAATAAAAAA TTCGATCTCG AAGAAATTTC TGAAAATTTT
GGAGCAGAAT ATGAACCAGA ACAATTTCCG GGCGTAGTTT TAAAAATAAA CGATCCCAAA
GCTACTTTTT TAATATTTAA ATCTGGTAAA ATCGTCATAA ATGGCGTAAA ATCAAATGAA
GAATTAGAAA ATGCCGTAAG ATGGATCTGT GAAAACTTAA GTTAG
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| Protein sequence | MELPEINIVN VVGSCDLKTP MNLEKIYPLI ENSEYDPERY HCIYIRTPGI KRLVTIFKSG
KLNTAGSKSI EEAKSAVLEI VDKLNELGFT DKRPEVKIYN IVANISFNKK FDLEEISENF
GAEYEPEQFP GVVLKINDPK ATFLIFKSGK IVINGVKSNE ELENAVRWIC ENLS
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