| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0592 |
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| Symbol | trpA |
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| ID | 4929309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 556296 |
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| End bp | 557075 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640166096 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001097121 |
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| Protein GI | 134045635 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.493777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAC CTGTGTTAGT CAGTTTTTTA GTTTCTGGAG ATCCAAATCC GGATGCAACA
TTGAAATTTA TGAAAACACT CGATAAATAT TCGGGAGTAA TCGAGCTTGG AATTCCATTC
AGCGATCCTG TTGCAGACGG ACCAACGATT CAAGCGGCAG ATGTAAGGGC ACTTTCAAAC
GGATTTAAAA TTGCAAAATC CTTTGAAGTA TTGAAAGAAT TTAGAAAAGA GTCTGATACC
CCTGTAATTT TGATGACATA TTACAATCCA GTATTTAAAA GAGGAATCGA AAACTTCGTA
ATTAGTGCCA AAGAAGCAGG TGCAAAAGGG CTTATTATTG TTGATTTGCC ACTTCAAGAA
GCAACTGAAT ATAGAGAAAT CTGCAAAAAA CACGAAATGG GAACGGTATT TCTTGCAGCA
CCAAACACTC CCGAAGAACG TTTAAAAATA TCTGATGAAG CAAGTACTGA ATTTTTATAT
CTTATTTCAA CTTTTGGGAT AACTGGTGCA AGGGATACCT TTGAACAGAT GACTTTTGAT
TTTATTAAAC GAGCAAGGAC AACATGCAAA GGAAAAATCT GTGTTGGATT TGGAATTTCA
AAAGGAAGTC ATGCAGAAAG TTTAATCGAG CAAGGTGCTG ATGGAGTAAT TGTTGGAAGT
GCTTTTGTAG ACATTATTAA AAATTACGGA GATTCAGAAG AAGCGCTTGT TAAATTAGAA
GAATTCGCAA AAGAATTAAG CGAAGGAATT GATAAAGGAT ACGAAAAAAG AAATAAATAA
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| Protein sequence | MNKPVLVSFL VSGDPNPDAT LKFMKTLDKY SGVIELGIPF SDPVADGPTI QAADVRALSN
GFKIAKSFEV LKEFRKESDT PVILMTYYNP VFKRGIENFV ISAKEAGAKG LIIVDLPLQE
ATEYREICKK HEMGTVFLAA PNTPEERLKI SDEASTEFLY LISTFGITGA RDTFEQMTFD
FIKRARTTCK GKICVGFGIS KGSHAESLIE QGADGVIVGS AFVDIIKNYG DSEEALVKLE
EFAKELSEGI DKGYEKRNK
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