| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0570 |
|---|
| Symbol | |
|---|
| ID | 4927725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 528494 |
|---|
| End bp | 530626 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640166074 |
|---|
| Product | replicative DNA helicase Mcm |
|---|
| Protein accession | YP_001097099 |
|---|
| Protein GI | 134045613 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.480124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG ATGAAGAAGT TTTTTTAACT TTTTACGGCG ATAAATTAAA GAAATACATG
AAAGACCAGA TTTCACAAAA GATGGTTAAA AATAACGTTT TTGAATTTGA TATATGCGAT
TTTTTAAAAA ATTATTCTGA TTCTTGTGAT ATAAACGATC AAATAATTGA AAATCCAAAA
TTAGTCGAAG ATCCTCTTTT ATATATTTTT AAAGATGCTT ACATGGAGCT TTTTGGTGAA
GATGAGCATA TAAAAAAGGA ACTAGAAAAA ACACAGATCG CATTTAAAAA TCCGCTTGGA
TGCGACAAAA AAATTGACGA AATAACTTCT TCAGAAATGA ACAGGCTCGT TAAATTTGAA
GGAAATATCA TAAAAGCGGC AAAAGTCTGT GCATTATTAA AAAAAGCATG TTTTGTCTGC
CGAGCTTGTG GTGAAATTTC ATACAAAACA GTTCACGACT ATTTTGAGCA ACCAAGAAGT
TACTGCAAAA ATCAAAACTG TAGAAGCGAA ATGTCAATTG ATTACGACAG CTCTGCTTAT
GTAAATATTC AGGAACTTGA AATACAGCAG CCAATTGATT TGATGAGAAA TCCTGACGAT
CCTCCAAGGA GTATCCGTGT TTTTTTAGAA AATTCAGATG GAATTTATTC TGGAAGGGTT
GATGTTGTCG GAACAGTTAT GAAAAAACTT ACTCGACCAA ACATGCCAGT TTTTGAAATT
TATGCAAAAA GTAACTATGT AAAACTTGGA GAAAGCTTCC AAAAAATCGA AGTAAAGGAC
ATTATAAACA ACTACGATTT AATAAACACG TTAGATGAGC TTGGAAAAAA AGAAAATATA
ATTGATATTC TTTCAAATTA TTTAATCCCG CAAATTAAAG GTTACGATCT TGTAAAAAAA
TCGATATTTT TACAGCAGGT AAAAGCATGT ACTAAATTTT TACCAGATGG ATCAGAACTT
AGAAAAGACA GCCACATTTT ATTAATTACT GATCCAGGAA TTGGAAAATC TACAATGCTT
AGAAAAATTT CAAGACTTTT CCCTCAAAAT TCCTATGCAT CAGTTACTAC TGCAACTGGT
GGCGGATTAA CTGCAAACGT TGTAAGGGAA GCTACTGAAA TTGGTGATGG CTGGGTTGTA
AAGCCCGGGG TATTTGTTCG TGCAAATGAG GGAACTGCAT GTATTGATGA ATTAACGGTT
GATAAAAACG TCATGAAATA CATTTTAGAG GCAATGGAAT CCCAAACAAT ACACGTGAAT
AAGGGTGGAA TTAACGTAAA ACTTCCTGCA AGATGCGCAG TTCTTGCAGC ATGTAATCCA
AAACGAGGAA GATTTGATAG AAATATGGGC GTAGTCGAAC AGATTGGAAT TCCTGCTCCA
TTATTAAGCC GTTTTGATTT AATATTCCCT TTAAAAGATT CGCCAGATAA ACGAAGGGAT
GCAGAAATTG CAGAGCACAT ACTTGATACC CACATTGAAA CTGCAACGAA AAACTATTCA
AAAGTTCTCG GTTCAATTGA AATCGATGGA ATAACCGTTG ACGAGAATTT AATTAAAAAT
TATATAATTT ATGCGAGAAC TTGCGCATAT TTCGATGAGA ATCACCATTT GTATTCTGGA
GAAGTTGATG AGCGAAAAAT AAAAAGTCCT CCTCTTTCAA AAGATGCTAA AAAATTAATT
CGCGATTATT ATGTTGATAT GAGGAAACTT GGAGAAGGGG ATAATCCAGT TCCTGTTACT
GCAAGACAGC TCGAAGCTGC AATAAGGATT TCAGAAATGC ACGCAAAAGC AAGGCTTTCG
AGAGAAGTCG AAGAAAAAGA TGCAAAAATT GCAATCGATA TAATTGAAGA ATGCTTAAGA
CAGGTTGCAT ATGATCCAGA AACTGGAAAA TTTGACATAG ATAAGGGAAT GGGTGAAATT
CCAAAATCCA AACTGGATAA AATGGATAAA ATCGTGGACA TTATTCGAGA ACTCTCGGTT
TTAAGCAGCA GTGGCCTTGC AGATGAAGAT GATATAGTAG AAAAAGCTTC AGAATTTCAA
ATTTCCGAAA AGGAAGTATC TGACCTTCTT TCAAAATTAA AAAAGAGTGC AGATGTATTC
AGTCCAAAAT ATGGATATTA CAGGTTAACC TAA
|
|---|
| Protein sequence | MEFDEEVFLT FYGDKLKKYM KDQISQKMVK NNVFEFDICD FLKNYSDSCD INDQIIENPK
LVEDPLLYIF KDAYMELFGE DEHIKKELEK TQIAFKNPLG CDKKIDEITS SEMNRLVKFE
GNIIKAAKVC ALLKKACFVC RACGEISYKT VHDYFEQPRS YCKNQNCRSE MSIDYDSSAY
VNIQELEIQQ PIDLMRNPDD PPRSIRVFLE NSDGIYSGRV DVVGTVMKKL TRPNMPVFEI
YAKSNYVKLG ESFQKIEVKD IINNYDLINT LDELGKKENI IDILSNYLIP QIKGYDLVKK
SIFLQQVKAC TKFLPDGSEL RKDSHILLIT DPGIGKSTML RKISRLFPQN SYASVTTATG
GGLTANVVRE ATEIGDGWVV KPGVFVRANE GTACIDELTV DKNVMKYILE AMESQTIHVN
KGGINVKLPA RCAVLAACNP KRGRFDRNMG VVEQIGIPAP LLSRFDLIFP LKDSPDKRRD
AEIAEHILDT HIETATKNYS KVLGSIEIDG ITVDENLIKN YIIYARTCAY FDENHHLYSG
EVDERKIKSP PLSKDAKKLI RDYYVDMRKL GEGDNPVPVT ARQLEAAIRI SEMHAKARLS
REVEEKDAKI AIDIIEECLR QVAYDPETGK FDIDKGMGEI PKSKLDKMDK IVDIIRELSV
LSSSGLADED DIVEKASEFQ ISEKEVSDLL SKLKKSADVF SPKYGYYRLT
|
|---|
| |