Gene MmarC5_0554 details

Gene Information

• Locus tag: MmarC5_0554
• ID: 4928790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: -
• Start bp: 507352
• End bp: 509421
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640166058
• Product: V-type ATP synthase subunit I
• Protein accession: YP_001097083
• Protein GI: 134045597
• COG category: [C] Energy production and conversion
• COG ID: [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTTTAT TGAGACCCGC AAGAATGAAC AAAATTAGAG CGGTCATCTT GGATGAAAAA 
GTGGATCCTG TCATTAGACA ACTCCATGAA AGCGGGCTAG TGGAGTTATA CGACTTATCT 
ACGAAACTCG AAGACCCTGA ATGGAACGCG CTTATGTTGC CAGCTCCATC AGCCGAGTAT 
GGTAGAAATG TCGCCTCATT AACAATTAAA GTAAGTAGAA TATTGGACTT ATTTTCAAAT 
GTTAGTGTAG GAGAAAAAGC AGGTCTTTCA GGCGTACTTA ATCCAAAAGT ACCGGCAAAG 
AAGAAACTTT CATTTTCATC ATCTGAAGAA ATTACCTCAT ACATTGAAAA CGTTCTCGAG 
AGCGTTGAAG GGGAAATCTC AGAACCCGCT AGTAAGCTGG CCGAACTTGA AAATAGAAAA 
ACTATTCTTG AAACGTTAAA AGACAGTGTT AAATATTTAT CTGGTTTTGA TCTTGATTTG 
AAATTCCTCG GGGAAGGATC TTACACATAT ATTGTTTCTG GACTTGTTTC ACAAGAAAAT 
ATGTCTGAAT TAGAATCTTC ATTAGAAGAA GCTACTGAAG GATACGTTGA AATTGTAAAA 
GGAAATCCAG TAAATAAAAG CGAGAAGGAA CAAAAAATTC CAGTAATTGT CGCTACATTG 
AAACAATGTG CAGATGTTGT TGGCGCAGAA CTTAGAAAGT CTGGTTTTGA AAGACTTGAC 
ATCGCAAATG TTGAAGGAAC TCCATCAGAG ATTTTCAATG ATACTGAAAA AGAACTTTTA 
GGTATCGAAA ACGAAACAAA AGCTATTTTA GAAAAATTGA ACGCACTTTC CCAAAAATGG 
ACTGACGAAG TCTTGGTTTT GCATGAAGTT CTTGAAATTG AAAAAGAAAG AGCTGAAGCA 
TACTCAATGA CGGGTAAAAC CGAAAGGACA CACCTCATTG AAGCTTGGAC ACCTAAGAAA 
CATGTTAAAA AGGTTCAGGA AATTATCGAA AGCGCTTCAG AAGGATACGC AGTTGTTGAA 
GTTTCAGAGC CTGACGAACC AGTTGAAAGA ATACCAGTTA TGCTCGACAA TGCAAAAGCT 
GTAAAACCAT TCGAAATGCT TACAGAAATG TACGCACCGC CAAAATACAA CGAAATCGAC 
CCAACAATGA TGATAATGCC TGGTTTTTTA ATATTCTACG GTATTATGCT TACTGATGCG 
GTTTACGGTT TATTGTTAAC CTTGGCTGGT CTTGTACTCT GGACAAGAAT GGGTAAGGTA 
AGCAGTGGTG CATACAACTT GGGATATATC TTAACACTCT CAGGTCTTTC AACAGTATTC 
TTTGGAATAT TAACAGGTGG CTACCTTGGT GACTTCATGT ACCAGTTCCT CGGAATGGAC 
ATATATACCA CAGGATTTGC GCTTGTAAAC CCGCTCGGTG AAAGCACATA CATCAGTGCA 
GCAAAACCAT TACTCAGTCT TGGTGGTATT GATGTAAACA ATGGACCTAT GGCAATCTTG 
TTATTCTCAA TTGTAGCAGG TATTATTCAC CTATTCATTG GATTAACAGT TGGTCTTAAG 
GAATCATTGT CAAATGGATC AGTTTTAGAT GCATTCTTGA ATCAAGGTAT GTGGATATTA 
TTGATACTTG CAATAGTTGC TACAGTAGTA ACCGGAAACA TGATGATTGC AGGCGGTGCA 
GTAATCGCGG TAATCGCATT ATGTATGATT AAAGGATTCA TGAATGGCGG CATTCTCGAT 
GCTTTACTCG GTGCAATGGA TATTACAGGA TTTTTGGGTA ACGTTCTCTC TTACGCAAGG 
CTTTTAGCTT TATGTTTAGC TACAGGGGGT CTTGCAATGG CTGTAAACAT TATGGCTAAA 
TTATTAGGAG ATGCAGTTCC AGTAATCGGT ATTTTAATTG CAGTAGTAAT GCTCGTATTT 
GGTCACGCAT TCAACTTTGT TATGAATGGT CTTGGTTCAT TTATCCACTC ATTGAGGCTA 
CATTACGTAG AGTTCTTTGG CCAATACTAT GAAGGTGGAG GAAAGAAATT CTCCCCATTC 
AAAGCTAAAA GGGAATACAC TTCAAATTAA 

 

Protein sequence

MVLLRPARMN KIRAVILDEK VDPVIRQLHE SGLVELYDLS TKLEDPEWNA LMLPAPSAEY 
GRNVASLTIK VSRILDLFSN VSVGEKAGLS GVLNPKVPAK KKLSFSSSEE ITSYIENVLE 
SVEGEISEPA SKLAELENRK TILETLKDSV KYLSGFDLDL KFLGEGSYTY IVSGLVSQEN 
MSELESSLEE ATEGYVEIVK GNPVNKSEKE QKIPVIVATL KQCADVVGAE LRKSGFERLD 
IANVEGTPSE IFNDTEKELL GIENETKAIL EKLNALSQKW TDEVLVLHEV LEIEKERAEA 
YSMTGKTERT HLIEAWTPKK HVKKVQEIIE SASEGYAVVE VSEPDEPVER IPVMLDNAKA 
VKPFEMLTEM YAPPKYNEID PTMMIMPGFL IFYGIMLTDA VYGLLLTLAG LVLWTRMGKV 
SSGAYNLGYI LTLSGLSTVF FGILTGGYLG DFMYQFLGMD IYTTGFALVN PLGESTYISA 
AKPLLSLGGI DVNNGPMAIL LFSIVAGIIH LFIGLTVGLK ESLSNGSVLD AFLNQGMWIL 
LILAIVATVV TGNMMIAGGA VIAVIALCMI KGFMNGGILD ALLGAMDITG FLGNVLSYAR 
LLALCLATGG LAMAVNIMAK LLGDAVPVIG ILIAVVMLVF GHAFNFVMNG LGSFIHSLRL 
HYVEFFGQYY EGGGKKFSPF KAKREYTSN