| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0549 |
|---|
| Symbol | |
|---|
| ID | 4929283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 502672 |
|---|
| End bp | 504432 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640166053 |
|---|
| Product | V-type ATP synthase subunit A |
|---|
| Protein accession | YP_001097078 |
|---|
| Protein GI | 134045592 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1155] Archaeal/vacuolar-type H+-ATPase subunit A |
|---|
| TIGRFAM ID | [TIGR01043] ATP synthase archaeal, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTCG GTAAAATTAT CAAAATATCC GGTCCGGTTG TTGTTGCCGA AGGCATGAAA
GGTTCCCAGA TGTTTGAAGT GGTTAAAGTA GGAAACGAAG GTTTAACCGG GGAAATCATT
CAGTTAACTG AGGACGAAGC AATCATTCAG GTTTATGAAG AAACTGCTGG TATCAAACCA
GGAGAAGGCG TAGAAGGTAC TGGTGCTCCA TTATCAGTAG AACTCGGCCC TGGTATGTTA
AAAGCAATGT ACGATGGTAT TCAAAGACCT TTAAACGAAA TCGAAAATGC TACAGATTCA
ATTTACATCC CAAGAGGAGT AAGTGTTCCA TCAATCTCAA GAGATATTAA ATGGGACTTT
GAAGCAACTG CAGCAGTTGG AGATGAAGTT ATAACTGGAG ACGTTATCGG TACAGTTCAA
GAAACTGCAT CAATCGTTCA CAAAATCATG ATTCCTTTAG GAATTAGTGG TAAAATCAAA
GAAATCAAAT CAGGCAGCTT CACTGTTGAA GAAACAGTTG CAGTTGTTGA AACCGCTGAA
GGCGAAAAAG AAGTACAAAT GATGCAAAAA TGGCCTGTAA GAAAGCCAAG ACCATCAAAA
GGAAAACAGC CTCCAGTAAT TCCATTAATC ACCGGTCAAA GAGTCGAAGA TACATTCTTC
GGTGTTGCAA AAGGTGGTGC TGCAGCAATT CCAGGTCCAT TCGGAAGTGG TAAAACTGTT
ACACAACACC AGCTTGCTAA ATGGTCTGAC GTGGATGTTG TGGTATACAT CGGTTGTGGA
GAAAGAGGTA ACGAGATGAC AGAAGTTATC GAAGAGTTCC CACACTTGGA TGATATCAAA
ACAGGAAACA AATTAATGGA CAGGACCGTA TTAATTGCAA ACACATCAAA CATGCCGGTA
GCTGCTAGGG AAGCTTCAGT TTACACTGGA ATTACAATTG CAGAATACTT CAGAGACCAA
GGACTTGGTG TTCTCTTAAC TGCTGACTCA ACATCAAGAT GGGCAGAAGC AATGAGAGAG
ATCTCCGGTA GACTTGAAGA AATGCCAGGG GAAGAAGGAT ACCCTGCATA CCTTTCATCA
AAACTCGCTC AGTTCTACGA AAGAGCAGGA AGAGTTCAAT GTTTAGGTTC GGAAGACAAA
CATGGATTCG TATGTATTGT AGGTGCAGTT TCACCACCAG GTGGTGACTT CTCAGAACCA
GTTACATCAA ACACATTAAG AATCGTTAAG GTGTTCTGGG CATTGGATGC GAACCTTGCA
AGAAGAAGAC ACTTCCCTGC AATCAACTGG TTAACAAGTT ACTCACTCTA TATTGACGAC
ATCGCTGGCT GGTGGCAAGA AAACACCGCT GCAGACTGGA GATCATTAAG AGATGAAGCA
ATGACCTTAC TCCAAAAAGA AGCTGAACTC CAAGAAATCG TTCAACTTGT TGGTCCAGAT
GCACTTCCGG ACAGAGAAAG AGTTATCCTA GAAATTGCAA GAATGTTAAG AGAAGATTTC
TTACAGCAAG ATGCATACCA CGAAGTAGAC AGCTACTGTT CACCATTAAA ACAGTACAAC
ATGTTGAAAA TCATCATGAC TTACTACACA AAAGCATTGG ATGCAGTTGC TAAAGGTGCT
GACCCAGCAG GCATTTCAGC TGTTACTGTA AAAGGAGACA TCGCAAGAAT GAAATACCTG
ACTGATGACG AATTCATAAA CACGAAAGTA CCTGAAATCA TTAACAAAAT GGAATCCGAA
TTAGGTGCTT TAATCAAATA A
|
|---|
| Protein sequence | MVVGKIIKIS GPVVVAEGMK GSQMFEVVKV GNEGLTGEII QLTEDEAIIQ VYEETAGIKP
GEGVEGTGAP LSVELGPGML KAMYDGIQRP LNEIENATDS IYIPRGVSVP SISRDIKWDF
EATAAVGDEV ITGDVIGTVQ ETASIVHKIM IPLGISGKIK EIKSGSFTVE ETVAVVETAE
GEKEVQMMQK WPVRKPRPSK GKQPPVIPLI TGQRVEDTFF GVAKGGAAAI PGPFGSGKTV
TQHQLAKWSD VDVVVYIGCG ERGNEMTEVI EEFPHLDDIK TGNKLMDRTV LIANTSNMPV
AAREASVYTG ITIAEYFRDQ GLGVLLTADS TSRWAEAMRE ISGRLEEMPG EEGYPAYLSS
KLAQFYERAG RVQCLGSEDK HGFVCIVGAV SPPGGDFSEP VTSNTLRIVK VFWALDANLA
RRRHFPAINW LTSYSLYIDD IAGWWQENTA ADWRSLRDEA MTLLQKEAEL QEIVQLVGPD
ALPDRERVIL EIARMLREDF LQQDAYHEVD SYCSPLKQYN MLKIIMTYYT KALDAVAKGA
DPAGISAVTV KGDIARMKYL TDDEFINTKV PEIINKMESE LGALIK
|
|---|
| |