Gene MmarC5_0539 details

Gene Information

• Locus tag: MmarC5_0539
• ID: 4928512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 494949
• End bp: 495503
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640166043
• Product: CoB--CoM heterodisulfide reductase subunit C
• Protein accession: YP_001097068
• Protein GI: 134045582
• COG category: [C] Energy production and conversion
• COG ID: [COG1150] Heterodisulfide reductase, subunit C
• TIGRFAM ID: [TIGR03290] CoB--CoM heterodisulfide reductase, subunit C

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.214937
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAG CTGAAGAGTT GAACAAAGGT TTTGTGAACG AAATCATTGA AGCTGGAACT 
CCGGTTCCTG GAGAAAAAGA AGTAGCTTCA TTAAAATCAT GCTACCAGTG CGGTACCTGT 
ACAGGAAGCT GCCCAAGTGG TAGAAGAACT GCATACAGGA CAAGAAAAGT AATAAGGCAG 
GCATTACTTG GTATAGACAG TGTTTTAGAT AGTGACGACA TCTGGAAATG TACAACCTGT 
TACACCTGCT ATGAAAGATG CCCAAGAGAT GTTAAAGTAA CTGAAATCAT TAAAACAATC 
AGAAACTTGG CAGCTAAAAA AGGAAACATG GCAACCCCCC ACAAAATGAC CGCAGTATAT 
GTTTTAAAAG CTGGTCACGC AGTACCTGCA AACGACGATA CAGCAAAATT AAGAAAATCA 
ATCGGTCTAG CTGAAAAAGC GCCAATTGCA CAATTCAGCC AAAAAGACAT GGATGAAATA 
AGAACAATTG CTAAAAACTT AAAATTCGAT GAATTAATCG GATTTGACTG GAAAACAATG 
GGTTTAAAAC AATAA 

 

Protein sequence

MMKAEELNKG FVNEIIEAGT PVPGEKEVAS LKSCYQCGTC TGSCPSGRRT AYRTRKVIRQ 
ALLGIDSVLD SDDIWKCTTC YTCYERCPRD VKVTEIIKTI RNLAAKKGNM ATPHKMTAVY 
VLKAGHAVPA NDDTAKLRKS IGLAEKAPIA QFSQKDMDEI RTIAKNLKFD ELIGFDWKTM 
GLKQ