| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0497 |
|---|
| Symbol | |
|---|
| ID | 4929324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 452429 |
|---|
| End bp | 454321 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640166000 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_001097026 |
|---|
| Protein GI | 134045540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0431896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TAAATGGATT TAATTTTTCA AGTGAAAATT ACATTAAATT AATGAATAAC
GAAATAAAAC ATAGGGGACC CGATGATAGG GGATTCTTTT TGGATAATGA ACAAAAAGTG
TCTTTAGGGC ATGTTAGGTT ATCTATTTTA GATTTAACTG AAAAAGGACA CCAACCAATG
TTTTATTCAA AAGAAACAGC ATCCTGCAAC GAAAACTTTG AAAATGAGTT AATTCAAAAA
TGTAACGTTG CAATATGTTA CAATGGAGAA ATTTATAATT ATCAAGAATT AAAAGATGAG
TTAATTCAAA AAGGTTATAA TTTTAATACA AACTCAGATA CAGAAGTTTT ACTGGCTTCA
TATTTAGAAT GGGGTTTAGA ATGCGTAAAT AAGTTTAACG GAATGTGGGC ATTTTGCATA
TATGATAAAG AAAAAAATAT ACTATTTTTG AGCAGAGATA GACTTGGTGT TAAGCCAGTT
TATTACTATT TTGATGAAAA TTATTTCATA TTTAGTTCAG AGCTTAAAGG AATTTTAAAA
CATGATTATT TAAACTTAAG ATCTTTAAAA AATATTAATA AAGATGCAAT AGATCTTTAT
TTTTCATTAG GGTATATTCC ATCCCCTTAT TCGATATACA ATAACGTTTA CAAGATAGAA
TCTGCAAGTA ATCTTGTTTT TGATATACAT AAAAAAGAAA TTAATATTCA AAAATACTGG
GAACTACCTG ATTATAGTCC AAATAATGAT AAGAAAAAGT TACTCGAAGT GGGTAAAAAG
TTACTCGAAG ATTCAGTTAA ACTAAGAATG CGTTCAGACG TTCCAGTAGG TGCTTTTTTA
AGTGGCGGGA TAGATTCTTC AACAGTTGTG GGCATTATGA AAAATTTTAC GAACTTGGAG
AAATTACATA CCTTTTCAAT TGGTTTTGAA GGCGATTATG ACGAAACGCC ATATATAAAT
ATGGTTAAAG ATGATTTTAA GACAATACAT CACCACGAAT ATTTTAAAGA GAATGATTTT
GAGAATATTG TTGATATTTT TTCCGAAATC TATGACGAAC CTTTTGGAGA TTATTCTGGT
TTTCCAACGT ATTTTTTAAG CAATATGGCT AAAAAAACTG TTATCGTTTC CCTGAGTGGT
GACGGTGGGG ATGAAGTTTT TGGCGGTTAC AATATGCATC TTGCAGCAAA GAGATTGGAA
ATTATACGAA AGCTTCCAAA AATTTTAAGG CGCATTGGAT CAAAAATACC TGTAAAAGAG
AATTTAAATG GATTTTTTAA CATCTATTCC TTAAAAAAAG CGTTCGAAGT TTCTTTATCG
GATCCTGAAT TATTTTTTAT AAATTCATTC AGCGATAATC GATTAATAAC TGAAAAGTAT
TATGGATGGA CTATGGAAAA ACTTAAGTAT AGTTTAAAAA AGGGTGGCAA TGATTTAGTT
GAAGGATTTC GAATATATGA TTTATTATAC AATACCCTTT CAGATAATTT TTTAGTAAAA
GTCGATCGTG CTTCAATGAG AAATTCTTTA GAGGTAAGAA GTCCGTTTTT AGATTACCGA
TTTGCAGAGT TTGCACAAAA AATACCTTCA AAATGGAAAG TGGATTTATT CAATACAAAA
AAATTAATGA AAGAGCTCGT TAAAGGAGTT TTACCTTTAA AAATAATCAC TCGAAAGAAA
CAAGGTTTCA CACCGCCAAT TGAAAAATGG ATATTGGATA AAAAATATGA AAAAGATTTT
GAAAAAGGCC TTTTAATTTT AAAAGATATA AATCCGGATA TTCATGATTA TTATATTGAA
AAAGTAATGA ATAGAAATGA TAAATTGTCA ACCCACGCTA AAATAAGATT GTTTATTTTT
TCCAAATGGT GGGAAAAATG GATGGAATAT TAG
|
|---|
| Protein sequence | MCGINGFNFS SENYIKLMNN EIKHRGPDDR GFFLDNEQKV SLGHVRLSIL DLTEKGHQPM
FYSKETASCN ENFENELIQK CNVAICYNGE IYNYQELKDE LIQKGYNFNT NSDTEVLLAS
YLEWGLECVN KFNGMWAFCI YDKEKNILFL SRDRLGVKPV YYYFDENYFI FSSELKGILK
HDYLNLRSLK NINKDAIDLY FSLGYIPSPY SIYNNVYKIE SASNLVFDIH KKEINIQKYW
ELPDYSPNND KKKLLEVGKK LLEDSVKLRM RSDVPVGAFL SGGIDSSTVV GIMKNFTNLE
KLHTFSIGFE GDYDETPYIN MVKDDFKTIH HHEYFKENDF ENIVDIFSEI YDEPFGDYSG
FPTYFLSNMA KKTVIVSLSG DGGDEVFGGY NMHLAAKRLE IIRKLPKILR RIGSKIPVKE
NLNGFFNIYS LKKAFEVSLS DPELFFINSF SDNRLITEKY YGWTMEKLKY SLKKGGNDLV
EGFRIYDLLY NTLSDNFLVK VDRASMRNSL EVRSPFLDYR FAEFAQKIPS KWKVDLFNTK
KLMKELVKGV LPLKIITRKK QGFTPPIEKW ILDKKYEKDF EKGLLILKDI NPDIHDYYIE
KVMNRNDKLS THAKIRLFIF SKWWEKWMEY
|
|---|
| |