Gene MmarC5_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0479 
Symbol 
ID4928613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp435282 
End bp436370 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content35% 
IMG OID640165982 
Productsuccinyl-CoA synthetase (ADP-forming) beta subunit 
Protein accessionYP_001097008 
Protein GI134045522 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC ACGAATATGA AGCAAAGGAA ATTTTTAAAG AAAATGGAAT CCCTGTTCCA 
AAAAACAAAC TTACATGCGG TAAAGTCGAC AGTATCGAGT ACCCTGTCGT TATAAAAGCG
CAAGTATTAG TCGGTGGAAG AGGAAAAGCT GGCGGAATAT TATTTGCAGA TAATTTAGAT
GATGCAAACA AAAAAATTGA ATCATTGATT GGAAACACAG TAAAAGGAGA ACTCGTTGAA
AAAGTACTCC TTGATGAACA AATTAAAATT GCAAAAGAAT ACTATGTTGG CGTTGTTGTT
AACAGGAACG AAAAAAACAA TGTTGTCATA TTTTCAACAG AAGGTGGAGT AGATATTGAA
GAAGTGGCTT CAAAAACTCC CGAAAAAATA ATAAAATTAC CGTTAGAATC TGGAAAAGAA
TTTTTACCAT ACCTTGCAAG AGAAATGCTC AAAAAAGCAG GCATTCCGAG TGCAGAAATT
CCAAAAGTTG CGGATGTTTT ATGCAAAGTT TACAAAGCAT TCAAAAACAT GGATGGAATT
TTAGCTGAAA TAAACCCGTT GGTATTTACC GAAGATGGAA AAATCATTGC TGCTGATGCA
GTTTTGAATA TTGATGACGA TGCGTACTTT AGACATAAAT ACGATAAATT TGAAGAATTT
AAAAAACAGG AAAAATCCGA ATTTGCATAT GTTGAACTTG ATGGGGACAT TGCAGTTATT
GGAAACGGTG CAGGACTCAC CCTTGCAAGC ATGGACATTG TAAAAGAGTT CGGCGGAGAA
CCTGCATGTT TCTTAGATGT TGGTGGCGGT TCCAATAGAG AAACTGTAAA AAAAGCACTT
TTAAAAGCAA CTTCAAGAAA AAATGTTAAA GGAGCGTTTA TCAACATTCT TGGTGGAATT
ACAAGATGCG ATGAAGTTTC ACTTGGAATT GTAGATGTTT TAAAAGAAAA TCCTAACCTC
AAGTTTGCAG TTAGGATGAT GGGGACTAAC GAAGAAAAAG GAAGAAAAAT TCTATCTGAA
AATGGAGTAA GTTTCGAAAA TTCAATGGAA GGGGCTGCAA GAGCACTTAC TGAATTAATA
AACAGTTAA
 
Protein sequence
MKLHEYEAKE IFKENGIPVP KNKLTCGKVD SIEYPVVIKA QVLVGGRGKA GGILFADNLD 
DANKKIESLI GNTVKGELVE KVLLDEQIKI AKEYYVGVVV NRNEKNNVVI FSTEGGVDIE
EVASKTPEKI IKLPLESGKE FLPYLAREML KKAGIPSAEI PKVADVLCKV YKAFKNMDGI
LAEINPLVFT EDGKIIAADA VLNIDDDAYF RHKYDKFEEF KKQEKSEFAY VELDGDIAVI
GNGAGLTLAS MDIVKEFGGE PACFLDVGGG SNRETVKKAL LKATSRKNVK GAFINILGGI
TRCDEVSLGI VDVLKENPNL KFAVRMMGTN EEKGRKILSE NGVSFENSME GAARALTELI
NS