Gene MmarC5_0387 details

Gene Information

• Locus tag: MmarC5_0387
• Symbol: cbiD
• ID: 4928999
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 348752
• End bp: 349849
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640165892
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_001096918
• Protein GI: 134045432
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.816983
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGA TTGATTTTAG ACTTGAAAAA ACTTTTGGAT ACACTACAGG TGCATGTGCG 
GCGGCTGGAT CATATTCTGC GCTCTATTTT TTAAAAAATA ATAAAAAATT AGATTTTGTT 
GAAATTTTAA ATTTAAAGGG CGATTCTTTA ATTATTCCTA TTAAAAATAT CGAAAAACAA 
GGAAACACTG CAATTTCAAC AGTTGAGAAA TTTTCAGGAG AAGATATTGA TATTACAAAT 
GGAATGGATA TCAAAATAAA AGTTACTCTT GAAAATATGG ATAATAATTG CTCAAAATCT 
AGCAACGTTA AAATTATCGG TGGAACTGGG GTTGGATTTA TTACAAAGTC CGGTTTACAG 
GTAAAACCTG GAAAACCTGC AATAAACCCG AAACCAAGAG AAATGATCGA AACTAATTTA 
AAATCACTTT TAAAAGATAA TGAATGTGTA ACTGTAAAAA TTTCAGTTCC AAATGGGGAT 
GAAATTGCTA AAAAGACATT AAATCCAAAA CTTGGGATAA TTGGTGGAAT TTCAATTCTT 
GGAACTACGG GAATTGTTCG TCCGATGTCA AATGACGCTT ACAAAGAGTC CCTTGCACCC 
CAAATTGATG TAGCTTTGGC GAATAATTTT AAAAACTTGA TATTTGTTCC TGGAAATATC 
GGAACAAAAC ATGCTAAAAT TTTATTGAAT GCAGAAGAAG ACCAGATTAT CGAAGTTTCA 
AACTTTTGGG ACCACATGCT TGATAAAGCG AAAGAGAAAG GAGTTAAAGA TATAACTGTT 
TTTGGACACG CTGGAAAAAT TGTAAAGCTT GCAGGAGGAA TTTTTGACAC CCATTCAAGG 
GTTGCGGATG CAAGAAACGA AATACTCTGC GCATATACAT CGTTAGCAAC ACAAGATGTA 
AAAATACTTC AAAAAATACT TCAATCGAAC ACAACTGAAG ATATAGTTGA AATATTAATT 
GAAAAAGGTA TTTTAACAGA AGTTTTTGAA AAAGTTTCAA AAAGAGTCGT CGAAAGGCTT 
TCTTTGAGGT GGGAAGGAAT TAATTTTTCA TGTATCATAA TAGATATGGA AGGGAATATA 
CTTGGAAAAT ATGTGTAA 

 

Protein sequence

MNKIDFRLEK TFGYTTGACA AAGSYSALYF LKNNKKLDFV EILNLKGDSL IIPIKNIEKQ 
GNTAISTVEK FSGEDIDITN GMDIKIKVTL ENMDNNCSKS SNVKIIGGTG VGFITKSGLQ 
VKPGKPAINP KPREMIETNL KSLLKDNECV TVKISVPNGD EIAKKTLNPK LGIIGGISIL 
GTTGIVRPMS NDAYKESLAP QIDVALANNF KNLIFVPGNI GTKHAKILLN AEEDQIIEVS 
NFWDHMLDKA KEKGVKDITV FGHAGKIVKL AGGIFDTHSR VADARNEILC AYTSLATQDV 
KILQKILQSN TTEDIVEILI EKGILTEVFE KVSKRVVERL SLRWEGINFS CIIIDMEGNI 
LGKYV