| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0336 |
|---|
| Symbol | pheT |
|---|
| ID | 4929353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 300228 |
|---|
| End bp | 301892 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640165841 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001096867 |
|---|
| Protein GI | 134045381 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0812381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTACAA TTAACGTGAA TAAGGTAGAT TTAGAACGAT TGAGCAATAT TTCCCTTTCG
GATAAGATAA TCGAAGACAG ATTTCCGATG ATGGGAGTAG AAGTAGAAGA AATATTTGAA
GAAGTCGATA AAAACGGGAA AAAACAGAAA ATGGTACAGT TTTCAATAAA TCCGGATAGA
CCTGATTATT TAAGTGTTGA AGGCCTTGCA AGAGGATTCA GGGGATTTAT GGGAATTACC
ACGGGAATCC AAGAATTTGA AGTACTCAAT TCAGACATTA AAGTAATTGT TGAAGAAAAT
GAAACAAGAC CGTATGTTGC ATTTGCACTT GTTAAAAATG TTTTAATGGA TGAATTCGTC
CTTGAAAGCA TGATAAACCT TCAGGAAAAA TTACACTGGG CAATTGGAAG AGATAGAAAG
AAACTTGCAA TTGGAATTCA CGACTTCGAT AAAGTAAAAG CTCCATTTAC TTACAAAGAA
ATCAAAGGCG ACGAGATTAA ATTTGTTCCT TTAGGATATG AAGACGAAAA AATGACTCCA
AGAGAAATTA TTGAAAAACA CGAAAAGGGA ATAAAATACG CTCATTTAAT TCAGAATGAT
AAATTCCCAA TTATTGTCGA TGCAAATGGC GAAGTTCTTT CAATGCCCCC CATAATTAAC
GGAACACTAA CAAAAGTAAC CCCAACATCC AAAAACTTAC TTATCGACAT TACTGGAACT
GAAAAAGAAG CTGTTGAAGA AACCCTTAAT ATTATCGTCT GCGCACTTGC AGAAAGACGC
GGAACCATTG TTTCAGTTGA TGTTAACGGA AAAAAATATC CTGATTTATC TTTAAAATCA
AGAATGATTT CTGTGGAATC AATCAACAAA AAATTAGGAC TGGAGTTAAA CCCCGGAGAA
ATGATTCAGG CTGTTAAAAA ATCTGGAATG GATGCACTCT ATGAAGATGG AAATTTGATT
GTAAAAATTC CTGCATACAG AAATGACATC TTACATAACG TTGATTTAAA AGAAGAAATT
GCTATAAACT ACGGCTATGA AAAATTCGAA GGAAAATTGC CATCAGTTGC AACTACTGGC
TCAAAAGACC CTGTTGAAAA AAAATGTAAC GCAATGTCTG ATTTGATGAT TGGACTTGGA
TTCTACGAAG TTATGAATCT TACACTTTCA AATCAAGACA CATTATTTGA AAAAATGAAT
TTAAAAGTAG AAGAAAAAGA CTACATTGAA GTTTTAAAAC CTGCTTCAAT CGAACACAGG
GTTCTTAGAA CTTCAATTCT ACCACTTCTT TTAGAAACAC TCTACATTAA CAAACATCAC
TCGCTTCCTC AAAAAATATT TGAAATTGGT GACTGCGTAG TTATCGATGA AAATGATACT
GAAACTGATA CCAAGTGTAA AAATATCAAG AAAATTGCGG GTGCGATAAC ACATCCTTTA
ACGAACTTTA ACGAAATAAA AAGTTCAACT GAAGCACTCC TAAGAGAGTT TTTTGAAGAT
TTTGAATTTG AAAACTACGA ACATCCAGCA TTCATACCTG GAAGATGTGC AAAAATAATC
AAAGATGGAA AAGAAGTAGG ATTTTTTGGA GAAATTCATC CTGAAGTGAT TTTAAACTTC
GAACTCGAAC ATCCGATAGT CGGATTTGAA ATAACAATCG AATAA
|
|---|
| Protein sequence | MPTINVNKVD LERLSNISLS DKIIEDRFPM MGVEVEEIFE EVDKNGKKQK MVQFSINPDR
PDYLSVEGLA RGFRGFMGIT TGIQEFEVLN SDIKVIVEEN ETRPYVAFAL VKNVLMDEFV
LESMINLQEK LHWAIGRDRK KLAIGIHDFD KVKAPFTYKE IKGDEIKFVP LGYEDEKMTP
REIIEKHEKG IKYAHLIQND KFPIIVDANG EVLSMPPIIN GTLTKVTPTS KNLLIDITGT
EKEAVEETLN IIVCALAERR GTIVSVDVNG KKYPDLSLKS RMISVESINK KLGLELNPGE
MIQAVKKSGM DALYEDGNLI VKIPAYRNDI LHNVDLKEEI AINYGYEKFE GKLPSVATTG
SKDPVEKKCN AMSDLMIGLG FYEVMNLTLS NQDTLFEKMN LKVEEKDYIE VLKPASIEHR
VLRTSILPLL LETLYINKHH SLPQKIFEIG DCVVIDENDT ETDTKCKNIK KIAGAITHPL
TNFNEIKSST EALLREFFED FEFENYEHPA FIPGRCAKII KDGKEVGFFG EIHPEVILNF
ELEHPIVGFE ITIE
|
|---|
| |