Gene MmarC5_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0324 
Symbol 
ID4928293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp287306 
End bp288562 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content35% 
IMG OID640165829 
Productglutamyl-tRNA(Gln) amidotransferase subunit D 
Protein accessionYP_001096855 
Protein GI134045369 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCG GTGATTTTGT AAAACTCGAA CTGGAAAACA CGACGTATTC TGGAACGGTA 
ATGCCTTCTT TAAACGAGGA TACTGTTGTA ATCAAAATGA AAAGCGGATA CAACGTTGGA
CTCGATAAGA AAAAAATAAA AAATATTGAA ATTTTGGAAT CAGGAGACAA ACCAAAATAC
GGCCTTCCAC CTCTTAATTT AGAAAAAAAC CCAAAATTAA AAAACATTTC TATTTTATCA
ACTGGTGGAA CAGTTGCTTC AAGAGTGGAC TATAAAACTG GAGCAGTTCA TCCTGCATTT
ACAGCAGATG ATTTAATTCG AGCAGTTCCC GAATTAATGG ACATTGCAAA CATCAAAGGA
AAAGTTATTT TGAATATTTT AAGTGAAAAT ATGCTTCCAG CTTATTGGAA AATGACTGCT
GACGCAATAA AAGAGGAAAT TGAAAACGGG GCTGAGGGAA TTGTTATTGC ACACGGAACA
GATACTATGC ACTACACTGC ATCAGCACTA TCATTCATGG TAACTTCAGA AGTTCCAATT
ATTTTGGTTG GCGCTCAAAG AAGTAGTGAT AGACCTTCTT CAGACGCAGC ATTAAACATA
ATTGCAGCGG TAAAAGCAGC AACTGAACCA ATAAAAGGAG TTTATGTATT AATGCACGGA
GAAACTGGAG ATACCGTATG CCATTTACAC GAAGGCACAA AGGTTAGGAA ACTCCACTCA
TCAAGAAGAG ACGCATTCAA ATCAGTAAAT GAAACCCCAA TAGCTGAAAT TAACCCATTT
ATAAAAAAAG TAACATATTT AAGGGATGTA AAAAGTCAGG ACAAGTCAAA AATCAAAGAA
GTAGTGTTAA ACACAGATTT GGAAGAAAAA GTTGCTTTAA TCAAAGTTTA TCCTGGGATT
GATTCTGAAA TTTTGAAGTT TTACGTTGAT AACGGATACA AAGGAATTAT TTTGGAAGGA
ACTGGACTTG GACACACTCC CGAAACCTTT TTTGAAGGAA TTGATTACGC AAATGAAAAC
AATGTTTTAG TTGCAATGAC TACTCAGACG ATCAATGGTC GAGTAAACAT GAATGTTTAT
TCAAATGGGC GAGAACTTCA AGCAAAAGGT GTAATTCCAT GCGAAGACAT GCTTCCAGAA
GTTGCATTTG TTAAATTAAT GCACTTACTT GGAAATTATG GATTTGAAGA ATCAAAAGAA
TTAATGTCTA AAAACATTGT CGGAGAAATT AACGAATCTA TTAATCTGGA GTGCTAA
 
Protein sequence
MDIGDFVKLE LENTTYSGTV MPSLNEDTVV IKMKSGYNVG LDKKKIKNIE ILESGDKPKY 
GLPPLNLEKN PKLKNISILS TGGTVASRVD YKTGAVHPAF TADDLIRAVP ELMDIANIKG
KVILNILSEN MLPAYWKMTA DAIKEEIENG AEGIVIAHGT DTMHYTASAL SFMVTSEVPI
ILVGAQRSSD RPSSDAALNI IAAVKAATEP IKGVYVLMHG ETGDTVCHLH EGTKVRKLHS
SRRDAFKSVN ETPIAEINPF IKKVTYLRDV KSQDKSKIKE VVLNTDLEEK VALIKVYPGI
DSEILKFYVD NGYKGIILEG TGLGHTPETF FEGIDYANEN NVLVAMTTQT INGRVNMNVY
SNGRELQAKG VIPCEDMLPE VAFVKLMHLL GNYGFEESKE LMSKNIVGEI NESINLEC