Gene MmarC5_0301 details

Gene Information

• Locus tag: MmarC5_0301
• ID: 4929297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 263125
• End bp: 264990
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640165803
• Product: glycoside hydrolase 15-related
• Protein accession: YP_001096832
• Protein GI: 134045346
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3387] Glucoamylase and related glycosyl hydrolases
• TIGRFAM ID: [TIGR01577] oligosaccharide amylase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.394812
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGGAA TTATTGGAAA TGGGAATATC CTCGCAAAAA TAGATGATTC TGGCTCTATC 
GAATACATGT TTTACCCGAG CCTCGGCTAT GAAAAACACA TTTTTGACGC TTCTTTTGCA 
ATTTTTAATC ACGGCCTTAA GTGGGCATGG GATAATGACT GGGATATTAA TCAAAGTTAC 
GTGAAAGACA CGAATATTTT GCGAACTACT TATGAATGCA GCGAATTTTT AATGGAATCA 
AGAGATTATA TCCCTATTTC TCACAATATA ATTATAAAAC AGATTTCAAT ATCAAATAAA 
ACAGACGAAA CTCAGGATTT AAAGCTATTT TTTTATGAAA ATTTACGAAT GGGGGAAATT 
CCAAAAGAAA ACACGGTTCA ATTTATCAAA GACTCCCAGA CGATACTAAA ATACGATGGA 
ACTTATTCCA CATGTATTGC AAGTGATAAA AAAATCGATT CATATCAATG CGGGGTTCGT 
TCATCAGATA GAAGTGCGTT AATTGATATT TCAAACGGAA TTTTAAAAGA ATATTCTACT 
TCATCAGGCC TTATAACTGA CAGTGCCATA TCCTGGGATT TAAAATTACT TCCTGGCCAA 
AAACAGTCAG TTTCTGTTTA CATAATCATG AACCAGTACA ATGGGGATTA TCAAAAATTA 
ATGGAAACTA TGGCTTCAAT CAAGGTTGTT ATTGATAACC ACGAAGATTT TTACCAGCTT 
ACAAATTCTT ACTGGAAAAA TTTACTTGAA ACAACGATTA GTAAACTTAG TGCAAACGAA 
TTAAATCGGG TGATGATGTG CGAAGATCTA TGTAAAAGAT CTTTTCTTAC CCTATTGCTG 
TTATGTGATC GTGGAGGGGG AATAATGGCA TCTCCTTCAC TTTATCCTGA TTACAGACAT 
GTCTGGTGTA GGGATGGAGG ATACATTGCG GTTGCACTTT CTCTTTGTGG TCAATCTAGT 
ATCTTGGAAA AATATTTTGA ATGGTGCAGA AAAACCCAAA ATGAAGATGG TTCGTGGGTT 
CAGAGTTACT ATATCAATGG AATTCCACGT TTAACAGCAA TGCAGATAGA TCAGGTTGGA 
ACTACTCTTT GGGCAGCTTT AATTCATTAT CGAAAGAGCG ATAATGGGAA ATTTTTAAAG 
AAAAATTGGG CAATGATAAA AAAGGCAGCA GATTATCTTT CAAATGCAGC AATAGCCCTT 
TATCCGAGCT ATGACCTTTG GGAAGAGAAA TACGGTGTGT TTACATATAC TCTGGGTTCA 
GTTTATGGGG GACTAAAATC TGCAATAGAA ATTGCAAAAA TTTTGGAAGA AACCGATGAA 
TCTATTGAAA AATGGCAAAA TGCAAGTGAT TTTTTAAAAG AAGAGGTTGT TGAAAAAATA 
TATTTAAATG ATAAAAATCG CTTTTTAAAG GCGCTGCATC CAAAAGACGA GGCTTTGGAT 
TCAAGCATAC TTGGAATAGC GTTTCCATTT AATTTAGTAA ATCCTGATGA TCCAAAAATG 
GTTGCAACAG CAGATCAAAT AGAGTCTGCA TTTAACTATA AAGTCGGTGG AATTGGTAGA 
TACCCAGAAG ACGTTTATTT TGGGGGAAAC CCCTGGATTA TAAACACTTT GTGGCTTTAC 
ATGTACTATG AAATGCTTGT TTATTCCCTT TCAAAAAATA AAGCAATTAA AAAAGAAATT 
TTAGAAAATT ACCGTGAAAA ATGTTCAGAA TTATTTGACT GGGTATGTAA ATATACATTT 
AGTGGTTTGA TGCCTGAACA GATACATAAG GATCTGGGTG TTCCAATTTC TGCAATGCCG 
TTAGGATGGT CGCATGCAAT GTTTATAATT GCAATTCACG GAGATTTTGA CCTATTAATT 
CCATAA 

 

Protein sequence

MVGIIGNGNI LAKIDDSGSI EYMFYPSLGY EKHIFDASFA IFNHGLKWAW DNDWDINQSY 
VKDTNILRTT YECSEFLMES RDYIPISHNI IIKQISISNK TDETQDLKLF FYENLRMGEI 
PKENTVQFIK DSQTILKYDG TYSTCIASDK KIDSYQCGVR SSDRSALIDI SNGILKEYST 
SSGLITDSAI SWDLKLLPGQ KQSVSVYIIM NQYNGDYQKL METMASIKVV IDNHEDFYQL 
TNSYWKNLLE TTISKLSANE LNRVMMCEDL CKRSFLTLLL LCDRGGGIMA SPSLYPDYRH 
VWCRDGGYIA VALSLCGQSS ILEKYFEWCR KTQNEDGSWV QSYYINGIPR LTAMQIDQVG 
TTLWAALIHY RKSDNGKFLK KNWAMIKKAA DYLSNAAIAL YPSYDLWEEK YGVFTYTLGS 
VYGGLKSAIE IAKILEETDE SIEKWQNASD FLKEEVVEKI YLNDKNRFLK ALHPKDEALD 
SSILGIAFPF NLVNPDDPKM VATADQIESA FNYKVGGIGR YPEDVYFGGN PWIINTLWLY 
MYYEMLVYSL SKNKAIKKEI LENYREKCSE LFDWVCKYTF SGLMPEQIHK DLGVPISAMP 
LGWSHAMFII AIHGDFDLLI P