| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0296 |
|---|
| Symbol | |
|---|
| ID | 4928989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 256257 |
|---|
| End bp | 257420 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640165798 |
|---|
| Product | formate dehydrogenase, beta subunit (F420) |
|---|
| Protein accession | YP_001096827 |
|---|
| Protein GI | 134045341 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.510341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG AAATGTATTA TGTACAGGCT TCTGACCCAG CAATACTCGA AAAAGGAGAA
TGTGGTGGTG CAGTTACCGC ACTATTCAAA TATCTTTTAG ACAAGGGTAT TGTAGATGGT
GTTTTAGCTT TGAAAAAAGG TGTCGATGTA TATGACGCAA TTCCAACGTT TGTTACATCT
TCAGAAGATT TGTTGAGTAC TGCAGGTTCT CTCCACTGCG CCCCTACAAT GTGGGGCGGA
ATTATAAAAG AATACTTACA AGATGCAAAA ATTGCAGTTC CCGTAAAACC TTGTGACATG
AGGGCAATTG TTGAACTTGC AAAAAGAGCA CAGATTAATC TTGACAATGT CTACATGATT
GGATTAAATT GCGGTGGAAC GGTTCCTCCA AAAACCGCAA TGGAAATGAT AAAATTGTTC
TACGAAGTAG ATCCAAAAGA CGTTGTAAAA GAAGAAATCG ACAAGGGTAA GTTTATAATC
GTAATGAACG ACGGATCCCA CAAAGAAGTT AAAATGCACG ATCTCGAAGA CAACGGCTAC
GGAAGAAGAG TAAACTGTCA GAGATGTGAT GAAAAAATCC CAAGAAAAGC AGACATTGCT
GCTGGAAACT GGGGTGTAAT TGGAGAGGAT GCTGGAAAAT ATACCTTCAT GGAGGTATGC
ACTGAAAAAG GTAAGCAATT ACTTGAGGAT GCAGAAAAAG ATGGATATAT TAAGAAAAAA
TCTCCAAATC CAAAAGGAAT TGAAATAAGG GCCAAAGTAG AAAGCTCAAT GTTGAAAATG
GGCGAAGACT ACAAAAACAA ATGGTTGGAA GAAGAATATC CAACAATTGA AGAATGGAAC
AGGCAATGGA ATAAATGTAT AAAATGCTAC GGCTGTAGGG ATGTATGTCC AGTATGTTTC
TGTAGAGAAT GTGCACTTAA TGCAGACTAC CTCGATTCAG GATCAATACC TCCTAATCCA
ATAATGTTCC AGGGAGTTAG AATGTCACAC ATGGCATTTA GCTGTGTAAA CTGCGGCCAG
TGTGAAGATG TATGTCCTAT GGAAATTCCA GTTGCAAGAA TATTCCACAA AGTTCAGGAA
AAAACAAGAA AAGAGCTTGG ATACAGGCCA GGTGTCGATG ATGAAGCACC ACCTGCTCTT
GGAGGCTCAT GCCCAACCCA ATAA
|
|---|
| Protein sequence | MSNEMYYVQA SDPAILEKGE CGGAVTALFK YLLDKGIVDG VLALKKGVDV YDAIPTFVTS
SEDLLSTAGS LHCAPTMWGG IIKEYLQDAK IAVPVKPCDM RAIVELAKRA QINLDNVYMI
GLNCGGTVPP KTAMEMIKLF YEVDPKDVVK EEIDKGKFII VMNDGSHKEV KMHDLEDNGY
GRRVNCQRCD EKIPRKADIA AGNWGVIGED AGKYTFMEVC TEKGKQLLED AEKDGYIKKK
SPNPKGIEIR AKVESSMLKM GEDYKNKWLE EEYPTIEEWN RQWNKCIKCY GCRDVCPVCF
CRECALNADY LDSGSIPPNP IMFQGVRMSH MAFSCVNCGQ CEDVCPMEIP VARIFHKVQE
KTRKELGYRP GVDDEAPPAL GGSCPTQ
|
|---|
| |