| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0295 |
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| Symbol | |
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| ID | 4928912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 254197 |
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| End bp | 256221 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640165797 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001096826 |
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| Protein GI | 134045340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0587435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAA ACTTTATCCA TACGATTTGC CCATATTGCG GAACAGGCTG CGGTGTGGAC
CTCGTAGTAA AGGATGGGAC ACTTGTTGGG ACCAATCCTT TTAAAAGACA CCCTGTAAAT
GAGGGAAAAA CCTGTATTAA AGGTAGTTAT TGTCACGAAT TTGTACACCG TGATGATAGG
TTGACAACTC CATTAATCAG AAAAAATGGA GAATTGGTGG AAGCATCATG GGATGAAGCA
CTCGACCTGA TTTCTGGTAA ATTACAAAAT TATTCCCCTG AAGAAATCGG ATTCTTTTCA
TCTGCAAGAT GTACCAATGA AGACAACTAT GTATTTCAAA AATTTGCAAG AACAGTAATG
AAAACTAATA ATGTTGATCA CTGTGCGAGA CTTTGACACT CGGCAACTGT GGTCGGTTTA
GGGCAAGCCT TTGGTTCAGG TGCTATGACA AATTCAATTT CTGATATAGA AGATGCAGAC
TGTATATTCA TAATCGGTTC AAATACGTTT GAACAACACC CTTTGATTGC GAGAAGAGTC
GTTCGAGCAA AAGAAAAAGG AACTAAAATA ATTGTAATAG ATCCAAGATA CACGCCAACT
GCAAAACAGG CTGATTTGTA CTTACAGTTA TTACCTGGTA CAAATATTGC AGTATTGAAT
GCAATAATGA ATGTTATTGT AAAAGAAAAC TTGATCGATG AAGAATTCAT CAAAAATAGA
ACAAAAGGAT ACGAAGAACT TAAGAAAACG CTTGAAACCT ATACTCCTGA GTATGCATCA
AAATTATCCG GTGTAGCTCC GGAATTAATT GTCGAAGCTG CTAAAATGTA TGGTAGTGCA
GGTGCAGCAT CGATACTTTA CTGTATGGGT ATAACGCAAT TTACAACTGG TGTAAACAAC
GTAAAATCTT GCTGTAACTT GGCAATGATT ACCGGAAACA TCGGAAAACC CGGAACTGGT
GTAAATCCAT TAAGGGGCCA AAATAACGTT CAGGGAGCAT GTGACATGGG TGCACTTCCA
AACGTATTCC CTGGATATCA GGCAGTTCCT GCAAACCATG AAAAATATGC GGAAGCATGG
AATACCACTG TTGATCCAAA TGTCGGTCTT TCGATTCCAG ACATGCTTGC AAAAGCTGGA
GAACAGGTTA AATGTGTTTA CGTAATGGGT GAAAACCCAA TGGTCTCAGA CCCAGACATT
CACCACGTGG AGCATGCGTT AAAAAGTCTT GATTTATTGA TAGTTCAGGA TATTTTCTTA
ACAGAAACTG CACAGGTTGC AGATGTAGTT TTACCTGGAG CTTCATGGGC TGAAAAGGAT
GGAACTTTCT CAAATACTGA AAGAAGAATC CAAAAAATCA ATAAAGCAGT AGATTCTCCG
GGTGAAGCAA TTGCTGACTG GAAAATCGTA AAAATGATTG CCGAAAAGAT GGGTCAGGGA
GAATTATTCA ACTTTGAAAC TCCTGAAGAA GTATTCCAAG AAATTGCAAA AGTAACTCCT
CAATATGCAG GTGTAACTTA CGACAGACTT GGTGTAGATG GACTCCACTG GCCATGCAAA
ACTTGTGAAG ACCCAGGAAC TCCGATTCTC CACTGTCAAA AATGTTTAAC TCCTGATGGA
CTTGGAAACA TCTTTGCAAT AGATTATGCA GATCCAGACG AAATGGCAGA TTCAGAATAC
CCAATGGTTC TTACAACAGG TAGGATCATT TTCCACTACC ACACCGGAAC AATGACCAGA
AGAAGTAAGC ACATGGCTGA TGAAATAAAC GAAGGATTTG TTGAAATTCA TCCAGACGAT
GCTAAAAATA TGGGAATTAA AAATAAACAA AAAGTCAAAG TTTCAACCCG TAGGGGCGAA
GTTGTTGTAA ATGCAAAAGT AACACCAAAT ATCAAACAAG GTGTCGTATT TATGCCATTC
CACTTTGCAG AAACTGCAGC TAACATCTTA ACAAATCCTG CTCAGGATCC AAACTGTAAA
ATCCCAGAAT ACAAAGTATG TGCTGCAAAA GTGGAGAAAA TATAA
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| Protein sequence | MELNFIHTIC PYCGTGCGVD LVVKDGTLVG TNPFKRHPVN EGKTCIKGSY CHEFVHRDDR
LTTPLIRKNG ELVEASWDEA LDLISGKLQN YSPEEIGFFS SARCTNEDNY VFQKFARTVM
KTNNVDHCAR LUHSATVVGL GQAFGSGAMT NSISDIEDAD CIFIIGSNTF EQHPLIARRV
VRAKEKGTKI IVIDPRYTPT AKQADLYLQL LPGTNIAVLN AIMNVIVKEN LIDEEFIKNR
TKGYEELKKT LETYTPEYAS KLSGVAPELI VEAAKMYGSA GAASILYCMG ITQFTTGVNN
VKSCCNLAMI TGNIGKPGTG VNPLRGQNNV QGACDMGALP NVFPGYQAVP ANHEKYAEAW
NTTVDPNVGL SIPDMLAKAG EQVKCVYVMG ENPMVSDPDI HHVEHALKSL DLLIVQDIFL
TETAQVADVV LPGASWAEKD GTFSNTERRI QKINKAVDSP GEAIADWKIV KMIAEKMGQG
ELFNFETPEE VFQEIAKVTP QYAGVTYDRL GVDGLHWPCK TCEDPGTPIL HCQKCLTPDG
LGNIFAIDYA DPDEMADSEY PMVLTTGRII FHYHTGTMTR RSKHMADEIN EGFVEIHPDD
AKNMGIKNKQ KVKVSTRRGE VVVNAKVTPN IKQGVVFMPF HFAETAANIL TNPAQDPNCK
IPEYKVCAAK VEKI
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