Gene MmarC5_0290 details

Gene Information

• Locus tag: MmarC5_0290
• ID: 4928248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 249412
• End bp: 251331
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640165792
• Product: integral membrane sensor signal transduction histidine kinase
• Protein accession: YP_001096821
• Protein GI: 134045335
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.400694
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACTA TACCACCTAT TAAACGATTA GGAACTAAAT TGATAATTTA TTCCATAATC 
ACGGCATTGA TTCCAATAGT AATGCTTGGT GCAGTATCCA CCGATACAAT AAACACTGAG 
ATGACAAAAC AAGCACAGGA AAAGATAAAT GACGATTTAA ACACTGCAGA AAGTGTGGTA 
AATCTTAAAT TGGATAAAAT ATCTGCAATG AACAGATATA TTGTTTTAAA TGAAAATACT 
GTTGATATTT TAAAGAATAA GGATATTTCT GAACTAAAGA ATCTGGCACT ATCCTACAAA 
GATGCATCAG ATCCTGATTT CGTAGTTTTT TTCGATAACA CTGGACAAGT AATTGCAAGA 
TCAAATTCTG ATGTAAGTGG GGATATATCT TATGATAATC TTTTTAAAAA GGTGGTAAAT 
AGTACAGGGT ATACCTCGAT AGAAGTTCTC GATAAAGAAG CCATAAAATA CGAAGATGTC 
GATGAAGTTG TAAATATTGA TATAAAAGGA ACGGAAGATT CAATAGATTC AACAGACAGT 
GTTCAGGATA GTGCAATGGC TTTAATATCC ATGGAACCAA TTTATGATGA AGATGGAACC 
TTGCTTGGGG CTGCAATGGC TGTTGATATA TTAAATAAGG ATTATTCTAT AGTGGATACA 
GTAAAAGATG CTTCAAAAGA TGCCACAACA ATATTTTTGG ACGGTGTTAG AATATCTACC 
AATGTTCAGG ACAATGGTGG AAGGGCCATT GGAACACTAG TTTCAGAAGA GGTTTATAAA 
TATGTTGTTT TAGGTGGGAA CACATATTAT GGTAGGGCAT TTGTGGTAAA TGAATGGTAT 
TTAACTGCTT ACGAACCAAT TTATGATTCA GATGATAAAA TTATTGGAAT GCTCTTTGTA 
GGTACGCCTG AAAGTAAATT TTTGGCATTA CAGGCAGATG TTAGAAACCA AACCTTTGCA 
GTAGGATTGA TTGGTTTATT CATTGCTTTA CTTGTATCTT ACCTAATAAA CCGTGGAATA 
ATAAAGCCAC TCGAACAGTT GAAACAGGGT GCTGAGCGTT TAAGTAATGG TAGATATGAC 
CAAAAGGTTA TTGTTGATTC AGATGATGAG TTTGGGGAAC TTGCGAAAGC TTTTAACAAA 
ATGGCAACTC AAATTAATAT TTCCGACGAA AAACTAAAAA AACACGCAGA AGAATTGAAA 
GCATCATACA ATGAATTAAA AGAACTCGAT AATTTAAAAT CAGAGTTAAT TGCAATCGTT 
TCACATGAAT TGAGGACACC TCTTACTTCC ATAAAAGGTT ACGTTGAACT AGTTCTTGAT 
GGAACGATGG GTGCAATAAA TGACTCGCAA AGAAAATGTT TACAAGTCGC AGATGATAAT 
ATAGTGCGAC TTAGGAGATT AATCGAGAGC ATGCTTGATC TTTCAAAGAT AGAGCGTGGA 
GAACTTGAAA TGTATCGGGA AAAAGTGAAT ATCTGCGAAA TCGTAGGCGA TGTTATTCAA 
TATTTAAAGC CACTCGCAAC AGAAAAAAAT ATTAAATTAA ATAAGAACGT TGAAAAGATC 
ACGCTAGAAG CCGATAAAGA TAGAATTACT CAAGTTCTCA CTAATTTGAT AGAAAATGCG 
ATAAAATTCA GCCCTGCAAA TGAATCTATA CTGGTAAACG GGACTTTAGA AGACGAAGGT 
CTGCACTTAA AAGTAACGGA TCATGGAGCA GGTATTCCTA AAAAAGATAT GGAAAAAGTA 
TTTGATAGGT TTTATCAGGT TGATTCATCA ACAAAACGGA AAAAAGGCGG ATCTGGACTG 
GGGCTTGCAG TCTGCAAGAG TATTGTTGAA GCACATGGTG GTTCAATCTG GGTTGAAAGT 
GAACTTGGAA AAGGAAGTAC TTTCCATATA ATACTTCCAA TTTCTGTCGA AGGGCAGTAA 

 

Protein sequence

MNTIPPIKRL GTKLIIYSII TALIPIVMLG AVSTDTINTE MTKQAQEKIN DDLNTAESVV 
NLKLDKISAM NRYIVLNENT VDILKNKDIS ELKNLALSYK DASDPDFVVF FDNTGQVIAR 
SNSDVSGDIS YDNLFKKVVN STGYTSIEVL DKEAIKYEDV DEVVNIDIKG TEDSIDSTDS 
VQDSAMALIS MEPIYDEDGT LLGAAMAVDI LNKDYSIVDT VKDASKDATT IFLDGVRIST 
NVQDNGGRAI GTLVSEEVYK YVVLGGNTYY GRAFVVNEWY LTAYEPIYDS DDKIIGMLFV 
GTPESKFLAL QADVRNQTFA VGLIGLFIAL LVSYLINRGI IKPLEQLKQG AERLSNGRYD 
QKVIVDSDDE FGELAKAFNK MATQINISDE KLKKHAEELK ASYNELKELD NLKSELIAIV 
SHELRTPLTS IKGYVELVLD GTMGAINDSQ RKCLQVADDN IVRLRRLIES MLDLSKIERG 
ELEMYREKVN ICEIVGDVIQ YLKPLATEKN IKLNKNVEKI TLEADKDRIT QVLTNLIENA 
IKFSPANESI LVNGTLEDEG LHLKVTDHGA GIPKKDMEKV FDRFYQVDSS TKRKKGGSGL 
GLAVCKSIVE AHGGSIWVES ELGKGSTFHI ILPISVEGQ