| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0280 |
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| Symbol | |
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| ID | 4927845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 241572 |
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| End bp | 242546 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640165782 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_001096811 |
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| Protein GI | 134045325 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.969351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTTC AATTTGGAGA TTTGATACCC AAAACGGAAA TCTCTTTAAA ATTTTTAAAG
AATAAAACTG TTGCAATAGA TGCGATGAAC GTAATTTACC AGTTTTTATC AAGCATTCGT
TTAAGGGATG GAAGTCCTTT AAAAAATAAG AATGGAGAAA TTACTTCAAC TTACAACGGT
ATTTTTTATA AGACAATTTA CATGCTAGAA AATGAAATGA CCCCAATATG GGTTTTTGAT
GGTAAATCTC ACGATTTAAA AGAAAAAACA AAAGAAGAAA GAAGGAAATC CCGAAATGGT
GCACTCGATA GTTATTTGGA AGCAAAAGAG CAGAATAACT TGGAAGAAAT GCAAAAATAT
GCTAAAAGAG CAAATTTTTT GGATAAAAAA ACAATAGATA ATTCCAAAAA ACTCCTTGAG
TTGATGGGAA TTCCATACAT CAATGCTCCA TCAGAAGGAG AAGCACAGTG TGCAGAACTT
GTAAAATCAA ACGATGCATT TTGTGTGATA AGTCAGGATT ACGATTCAAT CCTTTATGGT
GCAGAAAATG TTGTAAAAAA CATAACTTCA TCAAATAAAG ACATTGAATT GATAGAACTG
GAAAAAACTT TATCTGAACT GAACGTTTCT CTTGATCAGC TTATTGATGT TGCAATATTG
ATTGGAACTG ATTACAATCC TGGTGGGTTG AAAGGATTCG GTCCAAAAAA AGCAATTGAT
ACCGTTAAGA AAGGTAAAAT GGAAAATTAT ATATCCGAAA TTGAAAATTA TTCTGAAATT
AGAAAAATAT TTGATGAACC TAATGTAACA TCAGAATACG ATACAAAATT GAAAACCCCT
AAAAAAGAGG AGCTGGCAGA ATTTTTGATC GAAGAAAATG ATTTTTCAAA AGATCGAATT
TTACCAAACA TTGAAAAAAT TAGCAATCTT TTGGGCAATA AAAAATCCCA GAAAAGTCTT
GAAGCCTGGT TTTAG
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| Protein sequence | MGVQFGDLIP KTEISLKFLK NKTVAIDAMN VIYQFLSSIR LRDGSPLKNK NGEITSTYNG
IFYKTIYMLE NEMTPIWVFD GKSHDLKEKT KEERRKSRNG ALDSYLEAKE QNNLEEMQKY
AKRANFLDKK TIDNSKKLLE LMGIPYINAP SEGEAQCAEL VKSNDAFCVI SQDYDSILYG
AENVVKNITS SNKDIELIEL EKTLSELNVS LDQLIDVAIL IGTDYNPGGL KGFGPKKAID
TVKKGKMENY ISEIENYSEI RKIFDEPNVT SEYDTKLKTP KKEELAEFLI EENDFSKDRI
LPNIEKISNL LGNKKSQKSL EAWF
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