Gene MmarC5_0274 details

Gene Information

• Locus tag: MmarC5_0274
• Symbol: rps13p
• ID: 4929099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: -
• Start bp: 233736
• End bp: 234185
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640165774
• Product: 30S ribosomal protein S13P
• Protein accession: YP_001096805
• Protein GI: 134045319
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0099] Ribosomal protein S13
• TIGRFAM ID: [TIGR03629] archaeal ribosomal protein S13P

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTCAGA CAGAATTCAA ACACAGAATT AGAATCTCAA AAACAGACCT TGAAGGTAAA 
AATCCACTTG AATACGCACT ACAAGAAATG AAAGGTATTG GTAGAGCGAT GGCTAGAGCA 
GTAATCAGAG TTACTGAATT AGACCCTAAA CAACAGGCTG GTTACTTAGC TGACGAAGAT 
GTTTTGAAAA TAGAATCAGT ATTGGAAGAC CCTGCAACAC ATGGAATCCC TTCATGGATG 
TTCAACAGGA AAAAAGATGT TTACTCAGGA CTCGATAAAC ACCTTATCGA AACAGACCTC 
GTACTCACAG TACAAGAAGA CATCACAAAC ATGAAAAAGA TAAGATGCTA CAAAGGAGTC 
AGACACGAGT TAAGATTACC TTGTAGGGGA CAGAGAACCA GAGGTTCATT CAGAAAAGGA 
ACTTCAATGG GAGTTAAGAG AAGGAAATAA 

 

Protein sequence

MTQTEFKHRI RISKTDLEGK NPLEYALQEM KGIGRAMARA VIRVTELDPK QQAGYLADED 
VLKIESVLED PATHGIPSWM FNRKKDVYSG LDKHLIETDL VLTVQEDITN MKKIRCYKGV 
RHELRLPCRG QRTRGSFRKG TSMGVKRRK