| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0271 |
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| Symbol | |
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| ID | 4928789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 232195 |
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| End bp | 232737 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640165771 |
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| Product | DNA-directed RNA polymerase, subunit D |
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| Protein accession | YP_001096802 |
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| Protein GI | 134045316 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGG AATTAAAAGC CCCTTTATCT TTTTCCAGTG CATTAAGAAG AATAATGATT
TCAGAAGTCC CTACATATGC TATTGAAAAT GTATACTTTT ACGAAAACAC ATCTTCAATG
TACGATGAAG TTCTAGCTCA CAGACTTGGA TTAGTTCCAA TAAAAGGAGT TCCAGTAAGT
GGAGATGAAG TTATTGTACT TACAATATCC AAAGAAGGAC CTTGTATGGT ATACTCATCA
GACATAAAAT CTGAATCCGG TGAGCCTGCT TTTGAAAATA TTCCAATTGT AAAATTAGCA
GAAGGCCAGA AACTTGAGTT AGAAGCTGAA GCTCTTGTGG GCACAGGAAA AATTCATGCA
AAATGGCAAC CTTGTAATGC AGTTTACAAA CAGATATCAA ATGACGAAGT GGAATTTAAA
ATTGAGTCAT TCGGAAACAT GGATGCTGAA GACATTATAA GATCTTCACT TGAAATTTTG
AAAAATAAAG CTGAAAAATT CTTATCAGAA CTAGAAGGCC AAGAATTAAG TGACGAAAAT
TAA
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| Protein sequence | MKMELKAPLS FSSALRRIMI SEVPTYAIEN VYFYENTSSM YDEVLAHRLG LVPIKGVPVS
GDEVIVLTIS KEGPCMVYSS DIKSESGEPA FENIPIVKLA EGQKLELEAE ALVGTGKIHA
KWQPCNAVYK QISNDEVEFK IESFGNMDAE DIIRSSLEIL KNKAEKFLSE LEGQELSDEN
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