| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0230 |
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| Symbol | |
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| ID | 4929024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 199306 |
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| End bp | 200388 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640165729 |
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| Product | bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001096761 |
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| Protein GI | 134045275 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG1658] Small primase-like proteins (Toprim domain)
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGC AGGAATCTTT AGAAAAACTC CTTTTAATAA TTGATGATCT AAAATTACTG
GCTGAAAAAG GAATTCCGAT ATTGGTGGAA GGTCCAAATG ATATATTATC CTTGAAAAAT
TTAAAAATAA ATGCTAATTT TATAACTGTT TCAAATACTC CTATATTTCA GATAGCAGAC
GATTTAATTG CAGAAAATAT CCCTGAAATT ATACTTTTAA CCGATTTTGA TCGAGCCGGT
AGGGTTTATG CTAAAAATAT AATGGAAGAA TTTCAAAGCA GGGGAATTAA AGTAAATAAT
TTGATCAGAA AAGAGATAAT TAAGTATTCT CGCGGTGATT TAAAAGATAT TGAAAGCTTA
TACCCGTATA TTTCGAGAAG AATTACAATT AATAGCGATT TAAGTGATAT CATGATTCCT
TATGTTATAT CAAATGTTGG AATGACCTTA GATGGAAAAC TGGCCACAAT AGAAAATGAT
TCAAGAATTT CTGGTGAAAA CGATTTAAAA AGGGTTCACG AAATAAGAAA GGACGTAGAT
GCAATCATGG TGGGAATTGG AACTGTTTTA AAAGACGATC CAAGGCTCAC AGTTCACAAA
ATCAATGCAT CGCCAAAAGA TAATCCCTTA AGAATTGTGG TTGACAGCAA TTTAAAAGTT
CCATTAAATG CAAGAGTATT AAATAAAGAC GCGAAAACTG TGATCGCAAC AACAACGCCA
ATTTCGGACG AAAAAGAAGA AAAAATCAGA AAATTAAAAG AAATGGGAAT TATGGTATTG
CAGGCAGGGG TTCAAAAAGT TGATTTAAGA AAAATTATGA ACGAAATTTA CAAAATGGGA
ATAAATAAAA TTCTTCTCGA AGGTGGCGGA ACTTTAAACT GGGGAATGTT TAAAGAAAAC
TTGATAAACG AAGTTAGGGT ATATATCGCT CCAAAAGTAT TTGGAGGGGC AAATTCTCCA
ACATATGTTG ATGGAAAGGG GTTCAAAAAC GTTGAAGAAT GTACAAAATT AGAATTAAAA
AATTATTATC CATTGGATGA CGGAATTGTC TTGGAATATC GAGTAATTGG ATCATTTAAG
TAA
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| Protein sequence | MDKQESLEKL LLIIDDLKLL AEKGIPILVE GPNDILSLKN LKINANFITV SNTPIFQIAD
DLIAENIPEI ILLTDFDRAG RVYAKNIMEE FQSRGIKVNN LIRKEIIKYS RGDLKDIESL
YPYISRRITI NSDLSDIMIP YVISNVGMTL DGKLATIEND SRISGENDLK RVHEIRKDVD
AIMVGIGTVL KDDPRLTVHK INASPKDNPL RIVVDSNLKV PLNARVLNKD AKTVIATTTP
ISDEKEEKIR KLKEMGIMVL QAGVQKVDLR KIMNEIYKMG INKILLEGGG TLNWGMFKEN
LINEVRVYIA PKVFGGANSP TYVDGKGFKN VEECTKLELK NYYPLDDGIV LEYRVIGSFK
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