| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0224 |
|---|
| Symbol | |
|---|
| ID | 4928785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 193403 |
|---|
| End bp | 194554 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640165723 |
|---|
| Product | thiamine biosynthesis/tRNA modification protein ThiI |
|---|
| Protein accession | YP_001096755 |
|---|
| Protein GI | 134045269 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT TTATTGTGAG ATACGGAGAA ATTGGAACAA AATCAAGACA GACCATGCAC
AGGTTTGAAA AATTGCTTGC AAAAAACATT TCAAAGCTTG CAAAAAAACA CGGAATTTCC
GCAGAAGTTG AAATAATCCA TACAAGATTG ATTGTAGACA TTCCTAAAGA AAATTTTGAA
AAGATGAAGG AACTATTAAA AAAAGTACCT GGAATTGTAT CATTTAGCCC ATGCTATTAC
ATAGATCCTG ATATTGAAAA AATAAAGGAA ATTTCATCCG AACTTTTTGA AAAAGAAATT
GAAAAATACG AAAATAAAGA AAATATTACA TTTAGAGTAA AAACTCAAAG ACCGCAGAAA
AAATTCCCTT TAACTTCTCT TGAAGTAAAC ATGGAAGTTG GGGGGCCAAT TTCCGAAAAA
TATGGAATAC AAGTAGATTT AACAAATCCG ACAATTTCTC TTGATATCGA AGTATTCAAC
GAATACGCTT ACGTATTTGC AGAAAGAATT AGTGGAATTG GCGGAATTCC TGTTGGAACC
CAAGGTAGAG TTTTAGTATT ATTATCAGAT GGAATCGATA GCCCTGTTTC TGCATACATG
ATGGCAAAAA GAGGATGCAA ACTTTTACTT TTGCACATGA AAACTTCAGA TGAAGGACTT
GAAAAAACCC AGAAACTTGC TGATGTTTTA AGTGACTTTG ATCCAGAAGC TAAATTTGTA
TACATGGATT TTAAAGAAGA ACTTGAAAAA ATTAAAGCCG AACTTACTGA AATTAATAGG
GATAAATACA CGTGCCTTTA CTGTAAAAAA TACATGTTAA AAATGGCTGA AAAATACGCA
AAATGGCATA AATGTGATGC TATCATAAAT GGGGATAATA TGGGACAAGT TGCATCCCAG
ACTCTTAAAA ATTTGCGTGT GATTAGTGAA GGAATTGATT ATCCCATTTT AAGACCTTTA
ATCGGATTGG ATAAAATTGA AATTATGGAT ATTGCAAGAA AAATTGGAAC TTTTGGTATT
TCGACCAGTA AAGAAGTAAG CTGTTTTGCA GTTCCAAAAC ACCCTATAAC GAATGCAACA
CCTGAAGAAA TAGAAAAAAT TGAAGAACAG CTTTTAAATT TAAGAAATTG TAATGAATGT
AAAAATTGTT AA
|
|---|
| Protein sequence | MKKFIVRYGE IGTKSRQTMH RFEKLLAKNI SKLAKKHGIS AEVEIIHTRL IVDIPKENFE
KMKELLKKVP GIVSFSPCYY IDPDIEKIKE ISSELFEKEI EKYENKENIT FRVKTQRPQK
KFPLTSLEVN MEVGGPISEK YGIQVDLTNP TISLDIEVFN EYAYVFAERI SGIGGIPVGT
QGRVLVLLSD GIDSPVSAYM MAKRGCKLLL LHMKTSDEGL EKTQKLADVL SDFDPEAKFV
YMDFKEELEK IKAELTEINR DKYTCLYCKK YMLKMAEKYA KWHKCDAIIN GDNMGQVASQ
TLKNLRVISE GIDYPILRPL IGLDKIEIMD IARKIGTFGI STSKEVSCFA VPKHPITNAT
PEEIEKIEEQ LLNLRNCNEC KNC
|
|---|
| |