| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0217 |
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| Symbol | |
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| ID | 4928650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 187414 |
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| End bp | 188913 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640165716 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_001096748 |
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| Protein GI | 134045262 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.408076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCCC GTGTCGTTGT TGATGCATTT TTTAAAGAGA ACAGTTTAGT AAAACACCAC
ATCGATTCCT ACGATGATTT TGTGAAGAAT AAAATTCAAA AGATCATCGA TGAGGTAACT
GGTGTCGAAA CAGAAATTAA AGGAGGATAC AAAGTATCCT TTGCAAAAGT GAGAGTTACA
AAACCAATAA ATAAAGAAGC TGACGGTTCT GTAAAAGAAA TAACACCTAT GGAAGCGAGA
ATTAGAAACC TTGCATACTC TGCACCGCTT TATCTTGAAA TGATACCAAC AGTTGGCGAA
GATGAAGAAG AAAAGGTATT ATCCCCTGTT GAAGTTTATA TCGGAGAACT TCCAGTAATG
CTTGGTTCAG AAATCTGCCA CTTGTGCGGA AAATCTGATG AAGAATTGAT AAAATACGGC
GAAGATATAC AAGATCCTCT AGGTTATTTT ATTGTTAACG GTTCAGAAAA AGCAGTTGTT
GCTCAAGAAG ACCTTATTCC TAACAGAATT ATATGTGAAA AGGTAGAAAA AAACAACAAA
GTTGTAGATA TCGCAAAAGT ATTTTCAACT AGACATGGAT TTAGGGCACT TTGTACGGTT
GAGAGAAATC CAGATGGATT ATTAAATGTT TCATTCCCGG GAATGCCTAG CACAATTCCA
CTAGTTATAT TAATGAGAGC GCTTGGTGCA GAATCAGATA GAGAAATTAT CGAATTAATT
TCGGACGAAC CAACAGTTGT TATGCAATTA ATTGCAAACT TACAGGAAGC ACGAGAAGAG
CATGCAATAA ACACGACTGA AGATGCACTC GAACATATCG GAAAAAGAGT AGCTCCAGGA
CAGCCTAAAG AGTACAAATT AAAAAGAGCA GAAACAATTC TTTGCAACTA TTTATTGCCA
CACATGGGCG TAGAATCTGA GAAATTAGGT GCTAAATGTA AATATCTTGG AAGAATGGCT
AAAAACTCAA TCGAACTCTA CTTAGGATTA AGGGTTGAAG ATGATAAGGA CCATTATTCA
AATAAAAGAT TAAAATTAGC TGGAGACTTG ATGGAAGATT TGTTCAGACA TTCATTCAAC
CAGTTAATTA AAGATATTAA ATACCAACTC GAAAGACAAG CAATTAGAAA CAAAGAACCT
TCAATTCAAG CTGCAGTTAG AAGCGATGTT TTAACTGAAA GAATGAGACA TGCGATGGCT
ACAGGAAACT GGGTGGGTGG AAGAACAGGG GTATCTCAAC TTCTCGATAG AACCAGTTAT
CTTGCAACAG TATCCCAATT AAGAAGAGTT GTATCTCCAC TTTCAAGATC ACAACCTCAC
TTCGAAGCTA GGGACTTGCA CGCAACCCAA TGGGGTAAAA TATGTCCATC CGAAACACCA
GAAGGTCCAA ACTGTGGTCT GGTAAAAAAC CTTGCTGTAA TGTGCAAAGT AACTACTGAT
GAAGGCGACG ATAGCGTAAT CGAATTATTA AGAGAACTCG GTCTCACAAA GGAAAACTAA
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| Protein sequence | MESRVVVDAF FKENSLVKHH IDSYDDFVKN KIQKIIDEVT GVETEIKGGY KVSFAKVRVT
KPINKEADGS VKEITPMEAR IRNLAYSAPL YLEMIPTVGE DEEEKVLSPV EVYIGELPVM
LGSEICHLCG KSDEELIKYG EDIQDPLGYF IVNGSEKAVV AQEDLIPNRI ICEKVEKNNK
VVDIAKVFST RHGFRALCTV ERNPDGLLNV SFPGMPSTIP LVILMRALGA ESDREIIELI
SDEPTVVMQL IANLQEAREE HAINTTEDAL EHIGKRVAPG QPKEYKLKRA ETILCNYLLP
HMGVESEKLG AKCKYLGRMA KNSIELYLGL RVEDDKDHYS NKRLKLAGDL MEDLFRHSFN
QLIKDIKYQL ERQAIRNKEP SIQAAVRSDV LTERMRHAMA TGNWVGGRTG VSQLLDRTSY
LATVSQLRRV VSPLSRSQPH FEARDLHATQ WGKICPSETP EGPNCGLVKN LAVMCKVTTD
EGDDSVIELL RELGLTKEN
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