Gene MmarC5_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0187 
Symbol 
ID4928589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp157435 
End bp158481 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content39% 
IMG OID640165687 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001096719 
Protein GI134045233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.380466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA AAGTAGGTAT TTTGGGAGCT ACTGGAAACG TTGGACAGAG ATTTATCCAG 
ATGCTTGAAA ATCACCCAGT TTTTGAACTT GAAGCGCTTG GTGCATCACA AAGGAGCGCA 
GGAAAAACTT ACGAAGATGC ATGCTACTGG TACCAGACTG AAGCAATTCC TGAAGAAGTT 
GCAAGTGCAA CCGTTGTTTC AACAGATCCA AACGATAAGG CTTATGATGA TATTGATATT 
GTTTTTTCAG CACTACCTGC GGACCTTGCT AAAACACTGG AGCCAGAATT TGCTAAACGG 
GGAAAATACG TATTTTCAAA CGCTTCAGCA ATGAGAATGG AAGCAGATGT TCCATTAATT 
ATTCCAGAAG TAAACCACGA GCACTTTGGA ATGCTCGAAG TTCAAAAAAG CAACAGATGT 
TCAGATGGTG CAATAATTAC AAATCCAAAC TGTTCAACAA TTGGGGCAGT AATCTCATTA 
AAACCGATAA TGGATAAATT TGGAATTGAT TTAGTAAATA TCACCACAAT GCAGGCAATA 
AGTGGTGCAG GATACAGCGG AGTTCCTTCA ATGGCAATCT TGGACAATTT GGTGCCGTAC 
ATTGGTGGCG AAGAAGAAAA AATGCAGACC GAAGCATTAA AAATTCTTGG AAGTATCGAA 
GGAAACGATT TTAAAAACGG AAACTTTAAA ATTGGAGTAT CCTGTAACCG AGTTCCAGTA 
ATTGATGGCC ACACTGAAAG TATATTTGTA AAAACAACTG AAGAAGCAAC CCCTGAAGAA 
ATTGCAAAAG TAATGGATGA TTTTGATCCT TTAAAAGGTT TGAATTTATC AAGCTACGCA 
AAACCAATCG TTTTAAGGGA AGAAAATGAC AGGCCTCAGC CAAGACTTGA TAGAAATACT 
GGAAATGGGA TGTCAATTGT TGTTGGACGA GTTAGAAAAG ACCCTATCTT CAATGTAAAA 
TACACTGCAC TTGAGCACAA CACAATAAGG GGCGCTGCCG GAGCAAGTGT CTTAAATGCG 
GAATTATTCG TTCAAAAATA CCTTTAA
 
Protein sequence
MKIKVGILGA TGNVGQRFIQ MLENHPVFEL EALGASQRSA GKTYEDACYW YQTEAIPEEV 
ASATVVSTDP NDKAYDDIDI VFSALPADLA KTLEPEFAKR GKYVFSNASA MRMEADVPLI 
IPEVNHEHFG MLEVQKSNRC SDGAIITNPN CSTIGAVISL KPIMDKFGID LVNITTMQAI 
SGAGYSGVPS MAILDNLVPY IGGEEEKMQT EALKILGSIE GNDFKNGNFK IGVSCNRVPV 
IDGHTESIFV KTTEEATPEE IAKVMDDFDP LKGLNLSSYA KPIVLREEND RPQPRLDRNT 
GNGMSIVVGR VRKDPIFNVK YTALEHNTIR GAAGASVLNA ELFVQKYL