Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0181 |
Symbol | |
ID | 4928087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 147020 |
End bp | 150589 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640165681 |
Product | condensin subunit Smc |
Protein accession | YP_001096713 |
Protein GI | 134045227 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.797796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCAT TATCAGAAAT CCATATGAAA AACTTCAAAT CATTTAAAAA TTCAAAATTA AAAATTCCTG ATGGCTTCAC CGCGATACTG GGACCAAATG GATCAGGAAA ATCGAACACT ATCGATGGTA TTTGTTTTGT CCTTGGAAAA ACTTCAGCAA AATCGCTTCG TGCAGGTAAA TTCAACCAGT TGATAACTTA CCACAATGGA AAAAGGGAAA ATTTCGCAGA AGTTACGCTT TTTTTTGATA ATAAAGATAG AAAAATGCCT GTAGAGTCAG ATAAAGTTGG GATATCAAGA AAAGTTAAAC TAAACGGCGA CAACAACTAC TACATCATAT GGGATGAAGA AAAAGAAGTT AAAGAAAATG GGGAAATAAA AAAAGTAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT GAAATTTTAG ACGTTATTGG AAAAATATCA CTTAGTGCTG ACGGATTTAA CATCATACTT CAAGGAGACC TTATAAAAAT TATAGATACT ACCCCAAATG AAAGAAGAAA AATTATCGAT GAGATAAGCG GGGTTGCAGA ATTTGATGAA AAAGGGGAAA AAGCGGAAAA AGAACTTGGT AAAGCAAGGG AATTTATCGA AAAAATCGAT ATAAGGATTA ATGAAGTAAA AAATAACCTT GAAAAACTTA GAAAAGAAAA GGAAGATGCA GAAATATACG TAAAACTATC AGAAGAATTG AAAGCTACAA AATATATTCT AACTTCGAAA AAAATTGATT TCTTAAATGG AGTTTTAGAA AAAACTAAAG AAGAAATCGA AGCTCTTAAA GAAATGAAAG TCTGTTTCTT AAAAGAAATT TCTGAATACG ATGTAAAATC AAATGATATT AGAAATCGGC TTCAAAATTT AATAAATGAG CTAAATGAAA AAGGAAATGA AGAGATAATG GAACTTCACA AGTCTATTAA AGAAATGGAA GTTACCGTTG ATAACGACAA AAAATCATTA AATGGGGCTT TAGATGACTT GAAAAATGTA AATTCACAGT CAGAAAAAAA AGGACAGGAT TTAGTGGAAA CTAGACAAAA AATAGAAACT ATAAGGACTG AAACCCTAGA AAAAGAAGCA GAAATTAAAA CTTTAAAGAC TGAAATGGAA AATCTAGAAA CTGAAAAGAA GAAATTGAAG TCAAAAGTCG AAGAAAGCGA AACTCAAACT GAAATTTTAA AACAGCAAGA ACGAAAACTA TCTGAAAAAC TAAATGAAAG TCAGAACGAA CATTACAATT TAAAAAATGA ATTCAATGCT CTTGAAAATG AAATCAATAA AAAATCATTT AATTTAACTA AGAATAAAGA AACCATTGAA ACTTTACAGA AAGAACTCGA TGATATAAAG TCAGAGGGTG AAGATACAAA GGCACTCTAT AAAGAACTTG AAGACGTTGC TGTTGAGCTT GAATACTCTA AAAAGAAAGT TATCACGCTT TTGGAAGATA AAAAAGAATA TCAAGAAAAA TTGGATAACT CTCACGCTGA TTACATTAAA GAAAATGCTA AAATCAAAGC AATGAAAGAT ATGGAAGATT TCAGTATAGA TAGGGCTGTA AAAAGTGTTC TTGAAGCAAA ATTGCCGGGA GTAGTAGATA TTGCAGGAAA TCTCGGGAAA ACCGATGCGG AATACAAAAC TGCAATTGAA AATGCCGGTG GAAACAGGCT TAATTACATC GTTGTAAAAA GAATGGATGA TGGTGCAAGA GCAATTCATT ATTTAAAAAA GAATAATCTT GGTAGAACTA CATTCTTACC ACTCGATAGA ATCAATGGGC CTGAAGCACT TTATCTGGAT GATGAAGGTG TAGTTGGAAG AGCAATCGAT CTTGTTGAAT ATAAACCGGA ATACGAAGAC CTCTTTAGAT ACGTTTTTGG GAATACTATA ATCGTTGAAA ACTTAGATTA TGCGAAAATT CTCTCAAAAG ACCACAGAGC AAGATTTGTA ACCCTTGAAG GCGAAGTTAT CGAACCATCC GGTGCAATGA TTGGTGGACG TTCACGAAAA AAATCAGTTA TTAAAGTAGA TATTGATACT TCAAGGATTG AAAAACTTGC AGAACAGATT TCAGAACTTG ATAGCACATT AACTGAAACT AAAGATGAAA TTGAAAGATT GCAGAATAAA AATGCGACAT ACTCGACAAG AAAAATGGAA CTTGAAAGCA GATTAAAAAT TATTCGCGAT ACGGAACATA GAAAAGAAGG AATACTAACA AATAACGGAA TAAAAATTAA AGAACTTGAA TTGGAATCTA AAAAGTTAGA AGAAGAACTC GATTATTTAG ATGGTTCAAA AGAAGAACTT GAGAGAAAAA TTGAAGAATA CACTAAAAAA ATTAATGAAT TTACAGCACA GCGAAGTAGA ATTTCCGAAG AAATAACATC TTTTGAAAAT TCAGAACATT CCAAAAGAAT CAAAGTAATT GATGAAACTA TCCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAACGA AATAAAAAGG GATGCAGTAC TCATCAAAGA AATTTTAATC CCTAAAATAA GCGAATTAAA TAATAACATT AAAGAATTAA GTGAAAAAAG AGTAATTCTC GAACAAAATA TTCAATTCTA CAAAGCTAAT GTTGAAAAGA ACTTCGAAAT TCTAAAAAAC AAAAAAGAAC GCTACGAAGA CCTTACAAAG GACTTAAGAG AACTTACCGA AAAGAAAGAA GCCTTTGAAA AAGAACTGGA AATGTTAAAT GGCGAAAAAA GAAGAGTTTA TGGAAGAATT AACCAGAACG AAAGCCAGAT AAACAGCCTT TCAATCGACA TGGCAAAATA CGAAACGAGA CTTGAAGAAG AAAATAGGAA ATTGTACGTT TGTGAAAATA TCGAACATAT ATCTGAAGAT ATTACTTCAA AAATAAAAGA ATTCGACGTA GATGCTCTTG AAAGCCATCA GATCGACCTT GAAGGACATA TAAAAAAATT AGAACCAATA AACATGCGTG CTATTGAAGA CTATCAATTC ATAGTTGATA GATACGATGA ACTATTCGAA AAAAGAACAG ATTATGAAAA TGAAGAGAAA AAATACCTCC AGTTAATAGA AGAAGTTAGC AAAAGGAAAA AAGAAGTATT CATGGATACT TATGTAAAAG TTGCTGAAAA TTATGAAAAG ATATATACTG AAATTGGTGG AAGTGGAAAA TTAAGTCTTG AAAATTCGGA CGATCCATTT TCAGGTGGTT TATTAATTGA TGCTTCACCA ATGAATAAAA AATTACAGAG TCTTGATGTA ATGAGTGGTG GTGAGAAGTC GCTTACTGCG CTTGCATTCT TGTTTGCAAT TCAGCATTTG AATCCTGCTC CGTTCTATGT GCTTGACGAG GTTGATGCTG CACTTGATAC GAAAAATGCA GGATTAATCG GTGAAATGAT TAAGAATGCG TCAAAAAATT CACAGTTCAT TGTAATATCT CACCGTGAAC AGATGATAAG TAAATCTGAC GTGATGTATG GGGTTTGTAT GGAAAATGGG CTTAGTAAAT TAGTTGGATT AAAAATATAA
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Protein sequence | MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK FNQLITYHNG KRENFAEVTL FFDNKDRKMP VESDKVGISR KVKLNGDNNY YIIWDEEKEV KENGEIKKVM EEKRKKVKKS EILDVIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID EISGVAEFDE KGEKAEKELG KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLSEEL KATKYILTSK KIDFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDVKSNDI RNRLQNLINE LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET IRTETLEKEA EIKTLKTEME NLETEKKKLK SKVEESETQT EILKQQERKL SEKLNESQNE HYNLKNEFNA LENEINKKSF NLTKNKETIE TLQKELDDIK SEGEDTKALY KELEDVAVEL EYSKKKVITL LEDKKEYQEK LDNSHADYIK ENAKIKAMKD MEDFSIDRAV KSVLEAKLPG VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIHYLKKNNL GRTTFLPLDR INGPEALYLD DEGVVGRAID LVEYKPEYED LFRYVFGNTI IVENLDYAKI LSKDHRARFV TLEGEVIEPS GAMIGGRSRK KSVIKVDIDT SRIEKLAEQI SELDSTLTET KDEIERLQNK NATYSTRKME LESRLKIIRD TEHRKEGILT NNGIKIKELE LESKKLEEEL DYLDGSKEEL ERKIEEYTKK INEFTAQRSR ISEEITSFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR DAVLIKEILI PKISELNNNI KELSEKRVIL EQNIQFYKAN VEKNFEILKN KKERYEDLTK DLRELTEKKE AFEKELEMLN GEKRRVYGRI NQNESQINSL SIDMAKYETR LEEENRKLYV CENIEHISED ITSKIKEFDV DALESHQIDL EGHIKKLEPI NMRAIEDYQF IVDRYDELFE KRTDYENEEK KYLQLIEEVS KRKKEVFMDT YVKVAENYEK IYTEIGGSGK LSLENSDDPF SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA GLIGEMIKNA SKNSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI
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