Gene MmarC5_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0181 
Symbol 
ID4928087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp147020 
End bp150589 
Gene Length3570 bp 
Protein Length1189 aa 
Translation table11 
GC content31% 
IMG OID640165681 
Productcondensin subunit Smc 
Protein accessionYP_001096713 
Protein GI134045227 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.797796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCAT TATCAGAAAT CCATATGAAA AACTTCAAAT CATTTAAAAA TTCAAAATTA 
AAAATTCCTG ATGGCTTCAC CGCGATACTG GGACCAAATG GATCAGGAAA ATCGAACACT
ATCGATGGTA TTTGTTTTGT CCTTGGAAAA ACTTCAGCAA AATCGCTTCG TGCAGGTAAA
TTCAACCAGT TGATAACTTA CCACAATGGA AAAAGGGAAA ATTTCGCAGA AGTTACGCTT
TTTTTTGATA ATAAAGATAG AAAAATGCCT GTAGAGTCAG ATAAAGTTGG GATATCAAGA
AAAGTTAAAC TAAACGGCGA CAACAACTAC TACATCATAT GGGATGAAGA AAAAGAAGTT
AAAGAAAATG GGGAAATAAA AAAAGTAATG GAAGAAAAAC GGAAAAAAGT AAAAAAATCT
GAAATTTTAG ACGTTATTGG AAAAATATCA CTTAGTGCTG ACGGATTTAA CATCATACTT
CAAGGAGACC TTATAAAAAT TATAGATACT ACCCCAAATG AAAGAAGAAA AATTATCGAT
GAGATAAGCG GGGTTGCAGA ATTTGATGAA AAAGGGGAAA AAGCGGAAAA AGAACTTGGT
AAAGCAAGGG AATTTATCGA AAAAATCGAT ATAAGGATTA ATGAAGTAAA AAATAACCTT
GAAAAACTTA GAAAAGAAAA GGAAGATGCA GAAATATACG TAAAACTATC AGAAGAATTG
AAAGCTACAA AATATATTCT AACTTCGAAA AAAATTGATT TCTTAAATGG AGTTTTAGAA
AAAACTAAAG AAGAAATCGA AGCTCTTAAA GAAATGAAAG TCTGTTTCTT AAAAGAAATT
TCTGAATACG ATGTAAAATC AAATGATATT AGAAATCGGC TTCAAAATTT AATAAATGAG
CTAAATGAAA AAGGAAATGA AGAGATAATG GAACTTCACA AGTCTATTAA AGAAATGGAA
GTTACCGTTG ATAACGACAA AAAATCATTA AATGGGGCTT TAGATGACTT GAAAAATGTA
AATTCACAGT CAGAAAAAAA AGGACAGGAT TTAGTGGAAA CTAGACAAAA AATAGAAACT
ATAAGGACTG AAACCCTAGA AAAAGAAGCA GAAATTAAAA CTTTAAAGAC TGAAATGGAA
AATCTAGAAA CTGAAAAGAA GAAATTGAAG TCAAAAGTCG AAGAAAGCGA AACTCAAACT
GAAATTTTAA AACAGCAAGA ACGAAAACTA TCTGAAAAAC TAAATGAAAG TCAGAACGAA
CATTACAATT TAAAAAATGA ATTCAATGCT CTTGAAAATG AAATCAATAA AAAATCATTT
AATTTAACTA AGAATAAAGA AACCATTGAA ACTTTACAGA AAGAACTCGA TGATATAAAG
TCAGAGGGTG AAGATACAAA GGCACTCTAT AAAGAACTTG AAGACGTTGC TGTTGAGCTT
GAATACTCTA AAAAGAAAGT TATCACGCTT TTGGAAGATA AAAAAGAATA TCAAGAAAAA
TTGGATAACT CTCACGCTGA TTACATTAAA GAAAATGCTA AAATCAAAGC AATGAAAGAT
ATGGAAGATT TCAGTATAGA TAGGGCTGTA AAAAGTGTTC TTGAAGCAAA ATTGCCGGGA
GTAGTAGATA TTGCAGGAAA TCTCGGGAAA ACCGATGCGG AATACAAAAC TGCAATTGAA
AATGCCGGTG GAAACAGGCT TAATTACATC GTTGTAAAAA GAATGGATGA TGGTGCAAGA
GCAATTCATT ATTTAAAAAA GAATAATCTT GGTAGAACTA CATTCTTACC ACTCGATAGA
ATCAATGGGC CTGAAGCACT TTATCTGGAT GATGAAGGTG TAGTTGGAAG AGCAATCGAT
CTTGTTGAAT ATAAACCGGA ATACGAAGAC CTCTTTAGAT ACGTTTTTGG GAATACTATA
ATCGTTGAAA ACTTAGATTA TGCGAAAATT CTCTCAAAAG ACCACAGAGC AAGATTTGTA
ACCCTTGAAG GCGAAGTTAT CGAACCATCC GGTGCAATGA TTGGTGGACG TTCACGAAAA
AAATCAGTTA TTAAAGTAGA TATTGATACT TCAAGGATTG AAAAACTTGC AGAACAGATT
TCAGAACTTG ATAGCACATT AACTGAAACT AAAGATGAAA TTGAAAGATT GCAGAATAAA
AATGCGACAT ACTCGACAAG AAAAATGGAA CTTGAAAGCA GATTAAAAAT TATTCGCGAT
ACGGAACATA GAAAAGAAGG AATACTAACA AATAACGGAA TAAAAATTAA AGAACTTGAA
TTGGAATCTA AAAAGTTAGA AGAAGAACTC GATTATTTAG ATGGTTCAAA AGAAGAACTT
GAGAGAAAAA TTGAAGAATA CACTAAAAAA ATTAATGAAT TTACAGCACA GCGAAGTAGA
ATTTCCGAAG AAATAACATC TTTTGAAAAT TCAGAACATT CCAAAAGAAT CAAAGTAATT
GATGAAACTA TCCTTAATTT TGAAAAGAAA AAGAATGAAT TTGAAAACGA AATAAAAAGG
GATGCAGTAC TCATCAAAGA AATTTTAATC CCTAAAATAA GCGAATTAAA TAATAACATT
AAAGAATTAA GTGAAAAAAG AGTAATTCTC GAACAAAATA TTCAATTCTA CAAAGCTAAT
GTTGAAAAGA ACTTCGAAAT TCTAAAAAAC AAAAAAGAAC GCTACGAAGA CCTTACAAAG
GACTTAAGAG AACTTACCGA AAAGAAAGAA GCCTTTGAAA AAGAACTGGA AATGTTAAAT
GGCGAAAAAA GAAGAGTTTA TGGAAGAATT AACCAGAACG AAAGCCAGAT AAACAGCCTT
TCAATCGACA TGGCAAAATA CGAAACGAGA CTTGAAGAAG AAAATAGGAA ATTGTACGTT
TGTGAAAATA TCGAACATAT ATCTGAAGAT ATTACTTCAA AAATAAAAGA ATTCGACGTA
GATGCTCTTG AAAGCCATCA GATCGACCTT GAAGGACATA TAAAAAAATT AGAACCAATA
AACATGCGTG CTATTGAAGA CTATCAATTC ATAGTTGATA GATACGATGA ACTATTCGAA
AAAAGAACAG ATTATGAAAA TGAAGAGAAA AAATACCTCC AGTTAATAGA AGAAGTTAGC
AAAAGGAAAA AAGAAGTATT CATGGATACT TATGTAAAAG TTGCTGAAAA TTATGAAAAG
ATATATACTG AAATTGGTGG AAGTGGAAAA TTAAGTCTTG AAAATTCGGA CGATCCATTT
TCAGGTGGTT TATTAATTGA TGCTTCACCA ATGAATAAAA AATTACAGAG TCTTGATGTA
ATGAGTGGTG GTGAGAAGTC GCTTACTGCG CTTGCATTCT TGTTTGCAAT TCAGCATTTG
AATCCTGCTC CGTTCTATGT GCTTGACGAG GTTGATGCTG CACTTGATAC GAAAAATGCA
GGATTAATCG GTGAAATGAT TAAGAATGCG TCAAAAAATT CACAGTTCAT TGTAATATCT
CACCGTGAAC AGATGATAAG TAAATCTGAC GTGATGTATG GGGTTTGTAT GGAAAATGGG
CTTAGTAAAT TAGTTGGATT AAAAATATAA
 
Protein sequence
MASLSEIHMK NFKSFKNSKL KIPDGFTAIL GPNGSGKSNT IDGICFVLGK TSAKSLRAGK 
FNQLITYHNG KRENFAEVTL FFDNKDRKMP VESDKVGISR KVKLNGDNNY YIIWDEEKEV
KENGEIKKVM EEKRKKVKKS EILDVIGKIS LSADGFNIIL QGDLIKIIDT TPNERRKIID
EISGVAEFDE KGEKAEKELG KAREFIEKID IRINEVKNNL EKLRKEKEDA EIYVKLSEEL
KATKYILTSK KIDFLNGVLE KTKEEIEALK EMKVCFLKEI SEYDVKSNDI RNRLQNLINE
LNEKGNEEIM ELHKSIKEME VTVDNDKKSL NGALDDLKNV NSQSEKKGQD LVETRQKIET
IRTETLEKEA EIKTLKTEME NLETEKKKLK SKVEESETQT EILKQQERKL SEKLNESQNE
HYNLKNEFNA LENEINKKSF NLTKNKETIE TLQKELDDIK SEGEDTKALY KELEDVAVEL
EYSKKKVITL LEDKKEYQEK LDNSHADYIK ENAKIKAMKD MEDFSIDRAV KSVLEAKLPG
VVDIAGNLGK TDAEYKTAIE NAGGNRLNYI VVKRMDDGAR AIHYLKKNNL GRTTFLPLDR
INGPEALYLD DEGVVGRAID LVEYKPEYED LFRYVFGNTI IVENLDYAKI LSKDHRARFV
TLEGEVIEPS GAMIGGRSRK KSVIKVDIDT SRIEKLAEQI SELDSTLTET KDEIERLQNK
NATYSTRKME LESRLKIIRD TEHRKEGILT NNGIKIKELE LESKKLEEEL DYLDGSKEEL
ERKIEEYTKK INEFTAQRSR ISEEITSFEN SEHSKRIKVI DETILNFEKK KNEFENEIKR
DAVLIKEILI PKISELNNNI KELSEKRVIL EQNIQFYKAN VEKNFEILKN KKERYEDLTK
DLRELTEKKE AFEKELEMLN GEKRRVYGRI NQNESQINSL SIDMAKYETR LEEENRKLYV
CENIEHISED ITSKIKEFDV DALESHQIDL EGHIKKLEPI NMRAIEDYQF IVDRYDELFE
KRTDYENEEK KYLQLIEEVS KRKKEVFMDT YVKVAENYEK IYTEIGGSGK LSLENSDDPF
SGGLLIDASP MNKKLQSLDV MSGGEKSLTA LAFLFAIQHL NPAPFYVLDE VDAALDTKNA
GLIGEMIKNA SKNSQFIVIS HREQMISKSD VMYGVCMENG LSKLVGLKI