| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0172 |
|---|
| Symbol | |
|---|
| ID | 4928814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 142574 |
|---|
| End bp | 142882 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640165672 |
|---|
| Product | translation initiation factor Sui1 |
|---|
| Protein accession | YP_001096704 |
|---|
| Protein GI | 134045218 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
|---|
| TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000141332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAGA TTTGTCCTAT ATGTGGTTTA CCAAAAGATT TGTGTGTCTG TGAAGAGATT
GCAAAGGAAG AACAGAAAAT TAAAGTTTAC GTAACTAAAA GAAGGTTTGG TAAGCTGATG
ACAGTCGTCG ACGGCTTTGA TGCGGACTTG ATTGATGTAA AAGATTTGGC TAAAAAGTTA
AAAGATATAT GCGCTTGTGG CGGAACTGTA AAGAAAGATT CTATCGAGTT ACAGGGAGAC
CACAGGAGAA AAGCTGAAGA AACCCTTATC AAAATGGGAT TCTCAAAAGA CATGATTGAT
GTCAGATAA
|
|---|
| Protein sequence | MPEICPICGL PKDLCVCEEI AKEEQKIKVY VTKRRFGKLM TVVDGFDADL IDVKDLAKKL
KDICACGGTV KKDSIELQGD HRRKAEETLI KMGFSKDMID VR
|
|---|
| |