Gene MmarC5_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0162 
Symbolrpl32e 
ID4928292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp138026 
End bp138433 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content35% 
IMG OID640165662 
Product50S ribosomal protein L32e 
Protein accessionYP_001096694 
Protein GI134045208 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1717] Ribosomal protein L32E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000825784 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT TCAAAAGATT AATGAGATTA AAACTCAAAA TGAAACAAAA AAGACCTGAA 
TTTAAAAGAC AGGACTGGTT CAAGTGTTCA AGAATTGGAA CTAGCTGGAG AAGACCTTTC
GGTAAACACA GCGGTATGAG AATAGGATTG ACACACAGAG CTGCTGTTGC TACAGTAGGT
TACAGAGGAC CTGCTCTTGT TAGAGGATTA CACCCATCAG GTTTACAAGA TATTCTTGTT
AACAACGTAA AAGAATTAGT TGCATTAAAC CCTGAAATTC AAGGCGCAAG AATTGCAGCT
ACCGTTGGTA AAAGAAAAAG AATAGAAATC GTTAAAAAAG CTAATGAATT AGGAATTAGA
GTTTTTAACG TATCCAAACA AAAACAGGAC GAATTCTTAA GTTTATAA
 
Protein sequence
MSEFKRLMRL KLKMKQKRPE FKRQDWFKCS RIGTSWRRPF GKHSGMRIGL THRAAVATVG 
YRGPALVRGL HPSGLQDILV NNVKELVALN PEIQGARIAA TVGKRKRIEI VKKANELGIR
VFNVSKQKQD EFLSL