Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0162 |
Symbol | rpl32e |
ID | 4928292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 138026 |
End bp | 138433 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640165662 |
Product | 50S ribosomal protein L32e |
Protein accession | YP_001096694 |
Protein GI | 134045208 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1717] Ribosomal protein L32E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000825784 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAT TCAAAAGATT AATGAGATTA AAACTCAAAA TGAAACAAAA AAGACCTGAA TTTAAAAGAC AGGACTGGTT CAAGTGTTCA AGAATTGGAA CTAGCTGGAG AAGACCTTTC GGTAAACACA GCGGTATGAG AATAGGATTG ACACACAGAG CTGCTGTTGC TACAGTAGGT TACAGAGGAC CTGCTCTTGT TAGAGGATTA CACCCATCAG GTTTACAAGA TATTCTTGTT AACAACGTAA AAGAATTAGT TGCATTAAAC CCTGAAATTC AAGGCGCAAG AATTGCAGCT ACCGTTGGTA AAAGAAAAAG AATAGAAATC GTTAAAAAAG CTAATGAATT AGGAATTAGA GTTTTTAACG TATCCAAACA AAAACAGGAC GAATTCTTAA GTTTATAA
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Protein sequence | MSEFKRLMRL KLKMKQKRPE FKRQDWFKCS RIGTSWRRPF GKHSGMRIGL THRAAVATVG YRGPALVRGL HPSGLQDILV NNVKELVALN PEIQGARIAA TVGKRKRIEI VKKANELGIR VFNVSKQKQD EFLSL
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