Gene MmarC5_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0154 
Symbol 
ID4927862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp130159 
End bp132720 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content34% 
IMG OID640165654 
Productoligosaccharyl transferase, STT3 subunit 
Protein accessionYP_001096686 
Protein GI134045200 
COG category[R] General function prediction only 
COG ID[COG1287] Uncharacterized membrane protein, required for N-linked glycosylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGT TACTAAATAA AATCTCAGAT TTTTTCAAAA AGAACGAAAA AATAAAACTC 
ATTCTAATAA TATTGTTTAT AGGAATGATG AGCTTTCAAA TACGTGCACA GACTGCAGAC
ATGCCATTTG CAGAAGATAG TCAGTATTTA AAAGAGTTAT TCTCGGACGA TAATGGGAGG
ATGTATTTAA CTGCACTCGA TCCTTATTAT TACCTTAGAT TAACTGAAAA TTATCAAAAC
AGTGGTTATT CACATGTTGG GGAAACCATT GTTCAAATAG ACAATAAAAA TGTTCCTTAT
GACACTATAC AATATGCACC ACCAGGGCAT ACAGTTGGAT CAGTTTCCGC ACTATCTATC
GCCACAATTA TAGTATATTC ATTATGGAAC TCGTTAGATA GTACTGTAAC ACTATTAAAT
GCGGCATTTT GGGTTCCAGC AATAATGAGT ATTTTCCTTG GAATTCCAGT ATTTTTCATA
ATACGGAGAA ACACTTCATC AAATATGGGG GGACTTGTTG GGGCATTACT TTTGATTTCG
AGTCAGAGTT TGATATATAA AACTTCTGCA GGATTTTCGG ATACTCCGAT ATTTGAAATA
TTGCCTTTGT TATTTATTGT ATGGCTCATA ATGGAAGCAA TTCATGCACA GGACAATACT
AAAAAATCCG TGATATTTGG GGGACTTGCA ACAATATTAA TGGGAATTTA TCCAAAAATG
TGGCTCGGTT GGTGGTATGC ATATGACATT ACCGCAGGAT TTATGGCAAT ATATTTAGCA
TACGAATATA TCACAAAATC AAAAAATTTA AAAAATGTAC TCTATACCTC CACGTTATTT
TTGATCGGTG GAGGATTGAT CATTTCATTA ATATCCGGAA TAAACAAATT CATACAGGGG
GTATTCTCAC CCATAGGGTT CACTGCAATT TCCGAAGGTT CTAAGATAAC TGGATGGCCA
AATGTTTATA CAACAGTTTC GGAACTTGCA ATACCCACAT TTAACGAAAT CATAACAAAT
TCTGTTGGAA GCATTTTGTT ATTTATTGTG GGAGTAATAG GAATAATGTT CTCATTTGTT
TCATTTAGGC ACGAGAAAAG AGAATTTGAT ATAAAATACG CACTTTATTT AACATTGTGG
CTTTTAGCTA CGTTTTATGC TGCCACAAAA GGTGTAAGAT TTATTGCATT GATGACCCCT
GCACTTGCAA TAGGCATTGG AATATTTGCA GGTCAGGTTG AAAATATACT TAAAAGATAC
GAAAAAAAAG TGGAATACAT CTTATATCCC GTAATTGGGA TTATTTCGGC GGTTACTTTG
TTTAAATATG GTGCCGAAAT ATCAGATATA TTAATTCCTA CGACATATGT TCCGATTGTA
GTTTATATAT CGATAATTTC AATACTTTCC CTATTGATTT ACAAAATATC AGATATAATT
TCTGAAAAAG AAAATGCTTT CAAAAAAGTA TTTGGAATAC TTCTTGCAAT TATGTTGGTT
CTTCCATCAA TGGCTACGGC AGTACCATTT TATACTGCGC CCACAATGAA TGATGGTTGG
ATGGATAGTT TAAACTGGAT AAAAACAGAA ACTCCTGAAA ATTCCGTTGT TACTTGCTGG
TGGGACAACG GACACATCTA CACTTGGGCC ACAAGAAAAA TGGTAACATT TGATGGTGGA
TCCCAAAACA CTCCGCGGGC ATACTGGGTC GGACATGCAT TCTCAACTTC TGATGAAAAC
CTGTCTGTTG GAATTCTAAG AATGCTTGCG TCGAGTGGCG ATAGTGCATT TGATGAAGAT
AGTCTTTTAC TTAAAAAAAC AGGTTCGGTA AAAGATACTG TAAATATACT AAATGAAATA
CTTCCATTAT CTAAAAAAGA TGCTAAGGCA TTGCTTTTAG AAAAATATGG CCTAAACAGT
ACTGAAGTAG ACGAAATAAT CGCTTTAACA CACCCTGAAA ATACAAATCC TGATTATTTA
ATTACATATA ACCGGATGAC AGATATTGCA CAAGTTTGGA GTATGTTTGG AAACTGGAAC
TTTAGCTTAC CGTCAGATAC GGATAATAGT GTAAGAGATA AGGGATATTA TCAAAAATTA
ACTGGTACTG CAGAAGTAAT TAATAAAACC ACAGTAATTA GATTACCCTT GTATAGTGGT
GATGAATACG ACATTATAAA TATAATTGAA ATAAGCCAGT CTGGAATCGC AACAGCTAAC
GCATTAATTG ATACTGAAGG ACAAGTTGAA ATGCAAACTC CAAATTTCCA TAAACTGATT
TTAAAATTTG GGGAAAATGT CTATGAACAG GACATTAATG AAAATGGAGA TTACTCCGAA
ATCGTAAGAC TTGAAAAAGT ATCTGAAGAT ACATACCAAG TATACGCTTG GATATCGACC
AAAGATCTCG AAGATAGCGT ATATACAAAA TTGCATTTTC TTGACGGATA TGGACTTGAA
AAAATCAGCC TTGAAAAAGC TTCGCAAGAT CCAACCACTT ATGGCGTACA GCCAGGATTT
AAAGTTTACA GCGTAAATTA CGGAACAGAA TATCTCAATT AA
 
Protein sequence
MGELLNKISD FFKKNEKIKL ILIILFIGMM SFQIRAQTAD MPFAEDSQYL KELFSDDNGR 
MYLTALDPYY YLRLTENYQN SGYSHVGETI VQIDNKNVPY DTIQYAPPGH TVGSVSALSI
ATIIVYSLWN SLDSTVTLLN AAFWVPAIMS IFLGIPVFFI IRRNTSSNMG GLVGALLLIS
SQSLIYKTSA GFSDTPIFEI LPLLFIVWLI MEAIHAQDNT KKSVIFGGLA TILMGIYPKM
WLGWWYAYDI TAGFMAIYLA YEYITKSKNL KNVLYTSTLF LIGGGLIISL ISGINKFIQG
VFSPIGFTAI SEGSKITGWP NVYTTVSELA IPTFNEIITN SVGSILLFIV GVIGIMFSFV
SFRHEKREFD IKYALYLTLW LLATFYAATK GVRFIALMTP ALAIGIGIFA GQVENILKRY
EKKVEYILYP VIGIISAVTL FKYGAEISDI LIPTTYVPIV VYISIISILS LLIYKISDII
SEKENAFKKV FGILLAIMLV LPSMATAVPF YTAPTMNDGW MDSLNWIKTE TPENSVVTCW
WDNGHIYTWA TRKMVTFDGG SQNTPRAYWV GHAFSTSDEN LSVGILRMLA SSGDSAFDED
SLLLKKTGSV KDTVNILNEI LPLSKKDAKA LLLEKYGLNS TEVDEIIALT HPENTNPDYL
ITYNRMTDIA QVWSMFGNWN FSLPSDTDNS VRDKGYYQKL TGTAEVINKT TVIRLPLYSG
DEYDIINIIE ISQSGIATAN ALIDTEGQVE MQTPNFHKLI LKFGENVYEQ DINENGDYSE
IVRLEKVSED TYQVYAWIST KDLEDSVYTK LHFLDGYGLE KISLEKASQD PTTYGVQPGF
KVYSVNYGTE YLN