Gene MmarC5_0132 details

Gene Information

• Locus tag: MmarC5_0132
• ID: 4927730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 111144
• End bp: 111716
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640165632
• Product: ZPR1-related zinc finger protein
• Protein accession: YP_001096664
• Protein GI: 134045178
• COG category: [R] General function prediction only
• COG ID: [COG1779] C4-type Zn-finger protein
• TIGRFAM ID: [TIGR00310] ZPR1 zinc finger domain; [TIGR00340] ZPR1-related zinc finger protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.359877
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAC AATGTAATGT AATGGACTGC CCAATCTGCA GAAAAGAGAA TTCATTAAAA 
CTCATTACTC AGGAACTCGA AATACCTTAC TTTGGAAAAG TTATCGAAAC TACTATTTTT 
TGCGAGGAAT GCAAATACAA AAAAAGTGAT ATATTCCCAG TAGATGTAAA AGAACCTAAA 
AGATATACTT TAAGAGTCGA AGACGAATAT GATTTAAATA AACGGGTTAT ACGAGGTTCA 
TCAGGCCATA TTTCAATACC TGAATTTGGG TTTGAGGTGT CCCCAGGTCC CGCATCAGAA 
GCATACGTTT CAAATGTTGA AGGTGTATTA ACAAGAATGG AAGGCGCAAT CAAAACATTA 
ATGTCTTGGG TAGAAAGCGA AGACGAAAAG AAAAAAGCAG AAGAATTAAT CGAGAAATTA 
GAAGAAGTAA GACTTGGAAA AGAAAAAATA ACTTTAATTA TTGAAGATCC ACTTGGACAC 
AGTGCAATAA TTGGGGATGG CGTAAAAGAA GAAGTTTTAA CTGAAGAAGA GATAGCTTTG 
CTAAGTGATA ATACTATTAT TATGGATAAA TAA 

 

Protein sequence

MEKQCNVMDC PICRKENSLK LITQELEIPY FGKVIETTIF CEECKYKKSD IFPVDVKEPK 
RYTLRVEDEY DLNKRVIRGS SGHISIPEFG FEVSPGPASE AYVSNVEGVL TRMEGAIKTL 
MSWVESEDEK KKAEELIEKL EEVRLGKEKI TLIIEDPLGH SAIIGDGVKE EVLTEEEIAL 
LSDNTIIMDK