Gene MmarC5_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0112 
Symbol 
ID4927594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp99904 
End bp100545 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content34% 
IMG OID640165612 
Productsignal transduction protein 
Protein accessionYP_001096644 
Protein GI134045158 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0311515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA AAAGCTTGAT GGATAAAAAA TTTATTAAAA TATATCCTGA TTTTACTGTA 
CAGACGGTTA TTGACTTAAT GTATAAAAAT AAAAAATTCA GCACACCAAT TATTGACAAT 
GACGGTAAAA TGGTTGGCTG GACGACTGCT ATTGATTTGA TGGTAGTTTC CGATAAAAAT 
ATTCCAATAA AAGACATTAT GAGTCCCATT GCGGATGTAA TTGTTGTAAA TAAAAACGAA 
CCTGCAAGGG AAGCAGTTAC CAAAATAGTT GAATACAAAG TTATAAGCAT TCCAGTTTTA 
AATGACAGAG GACAGCTTGT TGGAATTGTT AGAAACTGCG ATATTACAAA AACTCTTTCT 
AAACTGTACG ACATTCCAGT ACACAGTATT TTTAAATCAT TAATGGGCGA ATTAAAAGGG 
ATTTCCTGGG AAGAATTAAT GAATGCTGCT GCAATCGTTA CAAAACAGAC TACTGGTGAA 
ACGATCACTG GTGAAGATTA CGAAAGAAGA ATAAAAGGTT CTACATTCGG GCAAGCCATC 
TGGGCTTGTG GGGGACTTGA AAAATTCTTT ACCGGCCTTA TAAAAATCGG TGAAGTTGCG 
CTCGCAAGAA AAGTAAGTTG CAAAAATGTC ATAAAAAAAT AA
 
Protein sequence
MKVKSLMDKK FIKIYPDFTV QTVIDLMYKN KKFSTPIIDN DGKMVGWTTA IDLMVVSDKN 
IPIKDIMSPI ADVIVVNKNE PAREAVTKIV EYKVISIPVL NDRGQLVGIV RNCDITKTLS 
KLYDIPVHSI FKSLMGELKG ISWEELMNAA AIVTKQTTGE TITGEDYERR IKGSTFGQAI 
WACGGLEKFF TGLIKIGEVA LARKVSCKNV IKK