Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0110 |
Symbol | |
ID | 4927595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 98286 |
End bp | 99479 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640165610 |
Product | hypothetical protein |
Protein accession | YP_001096642 |
Protein GI | 134045156 |
COG category | [S] Function unknown |
COG ID | [COG3681] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.108838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGATT CTAAACGCAT TTTAATTACA AAAATATTAA AAAACGAAGT AACGGAAGCA TTGGGATGTA CTGAAGTTGG ATTGATCGGT TACGCAGTTT CACTTTGTAA TATTTCAGAT CCTTTTTCGA TCGAAAAAAT CGAACTTACA CTAAATAATG GCTCTTTTAA AAATGTTTAC GCTGTAGGAG TTCCAAATAC TGGAAAATAT GGACTACTGC CTGCAGTTGT TGGCGGATTT TTGGGAAATT CTAAAAACAA ACTTTTAATT TTTAACGATA TAACTTACAG CCAAGAATTG GAAGATTTTA CCAAAGAAAA ACTCGAAATA AAAGTAATTA ATGGCCCATT ATACTGCAGT GTAAAAATTA AAGATAATTC TGGAAAAATT CATGAATCTT TAATTAAAGA CAATCATTTA AACGTTGTAA TTCCCGAAAT TAAAAAAGAA AAAATAAATA TGGAAATAAA TAGTTCTGAA AAAGAAAAAT ACAAAAACCT TGAATTATTG GATTTTTTAA ATTATCTAGA CGAAATTCCA GAAGAAATTA TTAAACTGGT TGAAAAAACA ATTTATACAA ATAAAAATTT AATTAAAGGC GACTTTTTAA ATTATGGGAC CGATATTTTG TCAAACATGG TTAATAAAAC CACGTCAGCC TGCAACATCC GAATGACTGG GGAAAATATG ACTGCAATGA GTGTTGCAAA AAGTGGAAAC ATGGGAATCA TGGCAACACT TCCAATAATT TCCTATGATT TTTCAACTGA AAATAATTCA GAAAAATTAA TAAAATCTGT TCTTCTTTCA ATGCTCGTTA CAATTTATTC TACGTATAAT TCATCATACC TTTCATCAAT GTGTGGATGC GTAAGTAAAG GTGGAATGGG GGCAGTTATT GGGCTTAGCC ACTACAAAAA TGGCAAAAAC CTTAAAAAAT TTGATAGTTC TGCAAGGACA TTCACTGCAA ATTTACCTGG AATAATATGC GATGGTGGAA AAGTTGGATG TGCATTAAAA CTTGCATCAG GATGTTTTGC AGCGTATTCT TCTCTTTTTG TCGATATATC TTATGAAAAT GGAATCGTCG GCAAAAATTT TAAAGAATGC GTTGAAAATA TTTCAAAAAT TAGTAAAGCA ATGGGAGATC TCGATTGTGA TATCGTAGAA ATCATGTCCA AAAAAGAAAT GTAA
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Protein sequence | MDDSKRILIT KILKNEVTEA LGCTEVGLIG YAVSLCNISD PFSIEKIELT LNNGSFKNVY AVGVPNTGKY GLLPAVVGGF LGNSKNKLLI FNDITYSQEL EDFTKEKLEI KVINGPLYCS VKIKDNSGKI HESLIKDNHL NVVIPEIKKE KINMEINSSE KEKYKNLELL DFLNYLDEIP EEIIKLVEKT IYTNKNLIKG DFLNYGTDIL SNMVNKTTSA CNIRMTGENM TAMSVAKSGN MGIMATLPII SYDFSTENNS EKLIKSVLLS MLVTIYSTYN SSYLSSMCGC VSKGGMGAVI GLSHYKNGKN LKKFDSSART FTANLPGIIC DGGKVGCALK LASGCFAAYS SLFVDISYEN GIVGKNFKEC VENISKISKA MGDLDCDIVE IMSKKEM
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