Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0078 |
Symbol | |
ID | 4928671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 66350 |
End bp | 66862 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640165577 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001096610 |
Protein GI | 134045124 |
COG category | [K] Transcription |
COG ID | [COG4800] Predicted transcriptional regulator with an HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCGC ATGAACGACT TTTATTGAGT GTGGGTTCAG ATAAGTTTAC GGATGAATTT AAGAAGGTTC TCCTTGAATT AGACGTTCCA TTAAAGGAAT TTTCTGAAAT ATCTGATATA CCGTACAGTA CACTTTATAA AATCACAAAT GAAAAGGATT TTAGAATATC AACTCTTAAA AAAATCATAA ATACTATAAA AAGCTTTGAA GAAGAGGATT CATCAGAAGA AAAAATAGCC CTGATTGCAG CAAGGCCATC ACTTAATAAA ATAAGTACAA AAAGGATAGC AGTAAATGGA AAAACTTATC TTTTGAAAGA ATATCCTGCA AGTACACTTG AAGACTGTAT CGTTTCAGCA ATATATGCAG AAAGAGAGGG TGTAAAAGCA ATAGTCTGTG CCCCGATTGT AAGTACCAGC ATTGAAAAGG TTGTAAGAAT ACCTGTTGCA GTTATTATTG CCGAAAAAAA TGCATTTATG GAAGCACTTG AAATCGTAGT TTCAAAGATT TAA
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Protein sequence | MRAHERLLLS VGSDKFTDEF KKVLLELDVP LKEFSEISDI PYSTLYKITN EKDFRISTLK KIINTIKSFE EEDSSEEKIA LIAARPSLNK ISTKRIAVNG KTYLLKEYPA STLEDCIVSA IYAEREGVKA IVCAPIVSTS IEKVVRIPVA VIIAEKNAFM EALEIVVSKI
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