Gene MmarC5_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0078 
Symbol 
ID4928671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp66350 
End bp66862 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content33% 
IMG OID640165577 
ProductXRE family transcriptional regulator 
Protein accessionYP_001096610 
Protein GI134045124 
COG category[K] Transcription 
COG ID[COG4800] Predicted transcriptional regulator with an HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGC ATGAACGACT TTTATTGAGT GTGGGTTCAG ATAAGTTTAC GGATGAATTT 
AAGAAGGTTC TCCTTGAATT AGACGTTCCA TTAAAGGAAT TTTCTGAAAT ATCTGATATA
CCGTACAGTA CACTTTATAA AATCACAAAT GAAAAGGATT TTAGAATATC AACTCTTAAA
AAAATCATAA ATACTATAAA AAGCTTTGAA GAAGAGGATT CATCAGAAGA AAAAATAGCC
CTGATTGCAG CAAGGCCATC ACTTAATAAA ATAAGTACAA AAAGGATAGC AGTAAATGGA
AAAACTTATC TTTTGAAAGA ATATCCTGCA AGTACACTTG AAGACTGTAT CGTTTCAGCA
ATATATGCAG AAAGAGAGGG TGTAAAAGCA ATAGTCTGTG CCCCGATTGT AAGTACCAGC
ATTGAAAAGG TTGTAAGAAT ACCTGTTGCA GTTATTATTG CCGAAAAAAA TGCATTTATG
GAAGCACTTG AAATCGTAGT TTCAAAGATT TAA
 
Protein sequence
MRAHERLLLS VGSDKFTDEF KKVLLELDVP LKEFSEISDI PYSTLYKITN EKDFRISTLK 
KIINTIKSFE EEDSSEEKIA LIAARPSLNK ISTKRIAVNG KTYLLKEYPA STLEDCIVSA
IYAEREGVKA IVCAPIVSTS IEKVVRIPVA VIIAEKNAFM EALEIVVSKI