| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0062 |
|---|
| Symbol | |
|---|
| ID | 4927735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 52542 |
|---|
| End bp | 53663 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640165560 |
|---|
| Product | alanine dehydrogenase |
|---|
| Protein accession | YP_001096594 |
|---|
| Protein GI | 134045108 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.463029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATTG GAGTACCAAA AGAAATTAAA AACAATGAAA ACAGGGTAGC TATCACACCA
GCAGGTGTAG AGGCTTTCGT TTTGGCAGGA CACAAAGTAT ACATCGAAAA AGATGCAGGT
CTTGGAAGCG CAATCACTGA CGAAGAATAC CTTGCAGCAG GAGCAGAAAT ATTAAAAACT
GCAAAAGAAG TATTCGACAT TGCAGAAATG ATCATTAAAG TTAAAGAACC TCTTAAATCA
GAATTTGAAC TTTTCAAAGA AGGACAAATC TTATTCACTT ACCTGCACTT GGCACCAGAA
CCACAGCTTA CACAAGCCCT TCTCGATAAA AAAATCACAG GTATTGCATA TGAAACAGTT
CAACTTGCTG ACAGAAGCTT ACCTCTCTTA ACTCCAATGA GTGAAATTGC AGGAAGAATG
TCAATCCAAC TCGGTGCACA ATATTTGGAA AAACAAGAAG GCGGAAAAGG TGTTTTATTA
GGTGGTGTTC CGGGAGTAGA ACCTGCTGAA GTTGTAATTG TGGGTGGTGG AATCGTTGGT
ACCAACGCTG CAAAAATCGC AGTAGGAATG GGTGCAAAAG TAACGATTTT AGATGTTAAC
ACAAGAAGAC TCGCTTACTT AGACGATATT TTCGGAAACA AAGTTACAAC CTTAATGTCA
AACAGTTTCA ACATTGCTAA AGCAGTTAAA AAAGCAGATT TACTCGTAGG ATGTGTTTTA
ATTCCTGGTG CGAAAGCTCC AAAATTAGTT TCAGAAGAAA TGGTTAAATC AATGCAGCCA
GGATCAGTAA TCGTTGACGT TGCAATCGAC CAAGGTGGAT CAATCGAAAC AATCGATAGA
ATCACAACAC ACGACAACCC AACTTACGAA AAATTCGGAG TTATCCACTA CGCAGTTGCA
AACATCCCTG GAGCAGTTGC AAGAACATCT ACATATGCAT TAACAAACGA CACGCTCCCT
TACGCATTAC AGATAGCAAA CAAAGGATAC AAACAAGCAG TAATTGAAAA CCCTGCATTA
TTAAAAGGAT TAAACACACT TAACGGAAAA GTAACTTACG AAGCAGTGGC AAAAGCACAC
GACCTCCCAT ACACGCCTGC AGAAAAAGCT TTAAATGAAT AA
|
|---|
| Protein sequence | MLIGVPKEIK NNENRVAITP AGVEAFVLAG HKVYIEKDAG LGSAITDEEY LAAGAEILKT
AKEVFDIAEM IIKVKEPLKS EFELFKEGQI LFTYLHLAPE PQLTQALLDK KITGIAYETV
QLADRSLPLL TPMSEIAGRM SIQLGAQYLE KQEGGKGVLL GGVPGVEPAE VVIVGGGIVG
TNAAKIAVGM GAKVTILDVN TRRLAYLDDI FGNKVTTLMS NSFNIAKAVK KADLLVGCVL
IPGAKAPKLV SEEMVKSMQP GSVIVDVAID QGGSIETIDR ITTHDNPTYE KFGVIHYAVA
NIPGAVARTS TYALTNDTLP YALQIANKGY KQAVIENPAL LKGLNTLNGK VTYEAVAKAH
DLPYTPAEKA LNE
|
|---|
| |