Gene MmarC5_0039 details

Gene Information

• Locus tag: MmarC5_0039
• ID: 4928807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 30553
• End bp: 31164
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640165537
• Product: nucleic acid binding, OB-fold, tRNA/helicase-type
• Protein accession: YP_001096571
• Protein GI: 134045085
• COG category: [R] General function prediction only
• COG ID: [COG4085] Predicted RNA-binding protein, contains TRAM domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGTCTT TAGTTCTAAA TGATAAAAAA ATAGTATTTT CATGTATTTT ATGCGTAATC 
TTTGGAATTT CTTTTTTATC GACATATAAC ATTGATCCCG AAGAAAAATA CATATCTAAT 
TTAAATGAGG GCGATTATGT AAAAATAACT GCTAAAATAC AGAAATTAGA TGTAAAAATG 
AAGGAATATC TCGAAGTTAC AGGAATAAAA TCCATAAAGT TAATGGATGA AACTGCTGGA 
GATCTTTTAG TTTACGTTTC AGACGATATA TCTGATGAAT TTTTAGAAAT TATATTGAAA 
ACAACCCCTA GAATAAAGGA AGGGGATATC GTTGAAGTAA CTGGAAAAAT TCAAATTTAC 
AATGGACTTT ATGAAATAGT TTTAAAAGAT CCAAATGATT TTGAATTAGT CGAAAAAGTA 
AATTTTGAGC GAGATATATT TCTTTCAAAA TCCAGAACAA ACTACTATGC CTCAAAAAAC 
AGTAAAGTGT ATCACAATTA TGAAGACTGC CCATATGGCG GAAAAATAGT TGAAAAAATC 
TATTTTAAAA CTGAAGAGGA TGCGATAGAT TTGGGATATG AATTATGCAG TTACTGTGAA 
AAAAGGGATT AA 

 

Protein sequence

MSSLVLNDKK IVFSCILCVI FGISFLSTYN IDPEEKYISN LNEGDYVKIT AKIQKLDVKM 
KEYLEVTGIK SIKLMDETAG DLLVYVSDDI SDEFLEIILK TTPRIKEGDI VEVTGKIQIY 
NGLYEIVLKD PNDFELVEKV NFERDIFLSK SRTNYYASKN SKVYHNYEDC PYGGKIVEKI 
YFKTEEDAID LGYELCSYCE KRD