Gene MmarC5_0034 details

Gene Information

• Locus tag: MmarC5_0034
• ID: 4928287
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 27051
• End bp: 27641
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640165531
• Product: haloacid dehalogenase superfamily protein
• Protein accession: YP_001096566
• Protein GI: 134045080
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2178] Predicted RNA-binding protein of the translin family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAATA GATCTTATTT AATAGAATTC TTTGAAAAAA AGAATAATAC CAGGGAAAAA 
ATTTTGAAGA TTTCAAGGGA AATTGTAAAG GATTCGGGAC TCATTATTCG AAAAATACAG 
AAAGGAACTG AGGTAGATTT TACAGATATT GAAGAAAAAT TAAAAGAATT AAAAAACTTT 
TCAGAAGATC ACTTCGAATT CCAAAAATAT AGGGGAACTC CTGAACAGGA GTATGTCGAA 
ACACGAGTTT ATTATTCGAT AATTTTTGAA AATAAAATTT TGGATTTTTT TGATTTTGAT 
AATATCTTGG AAGAAAGCTA TATTTTGGGT TTGTGTGACG TTATCGGCGA ACTTAGAAGA 
ATAATTCTTG AATCAATTCG AAAAGACGAA AAAACAAAAG CAGAACTTTA TTTTGAATAT 
ATGAATAAAA TTTACGACTT TTTAATGGAA TTTGATAATT ACCACGTAAT TGATGGACTT 
AGGAGAAAAC AAGATGTTTC AAGAAGTTTA ATTGAAAAAA CTCACGGAGA TATAATTAAT 
TTCAACGAAA ATCTGAAACT TAGAATAGAA CTTTCAAAAT TTAATAAATA A 

 

Protein sequence

MKNRSYLIEF FEKKNNTREK ILKISREIVK DSGLIIRKIQ KGTEVDFTDI EEKLKELKNF 
SEDHFEFQKY RGTPEQEYVE TRVYYSIIFE NKILDFFDFD NILEESYILG LCDVIGELRR 
IILESIRKDE KTKAELYFEY MNKIYDFLME FDNYHVIDGL RRKQDVSRSL IEKTHGDIIN 
FNENLKLRIE LSKFNK