Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0025 |
Symbol | |
ID | 4927616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 19480 |
End bp | 20832 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640165522 |
Product | signal recognition particle protein Srp54 |
Protein accession | YP_001096557 |
Protein GI | 134045071 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.205386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATA AATTAGGCCA GAACCTCTCT GATGCACTAA ACAAAATTAA GAACGCTACT TTTGTCGATA AAAAACTCGT AAAAGAAGTA ATTAAAGATA TCCAGAAAGC TTTAATCCAA TCTGACGTTA ATGTAAAGCT CGTATTTAAT ATGAGCAAGG AAATTGAGAG AAAAGCTATT GAAGAAGCGC CTCCAAAAGG ACTCTCGAAA AAAGAGCACA TTGTAAAGAT TGTTTACGAT GAACTTGTAA AATTACTTGG AGAAACCACT CAAAAATTAG AACTTGACCC TTCAAAAAAA TCTGTAATTT TACTTATAGG TATTCAGGGA AGCGGTAAGA CAACGAGTGC CGCAAAACTT GCAAGATATA TCCAGAAAAA AGGTTTAAGA CCTGGATTAA TCGCAGCGGA TGTTTACAGA CCTGCAGCAT ACCAGCAATT GAAGCAGCTA TCTGAAAAAA TAAATGTTCC ACTATTTGGT GACGAAACAA GAACAAAAAC TCCCGTAGAC ATCACTAAAG AAGGAATGGA AAAACTGAAA AAAGTAGATG TTATAATCAT CGATACAGCA GGTAGGCACA AGGAAGAAGA AAGTCTCTTA GCTGAAATGA AAGAAATGAA GGATTTAACC AATCCAAATG AAATAATCCT TGTAATTGAT GGAACATTAG GTCAGCAGGC TAAAAATCAA GCAAAAGCAT TCAAAGAATC AGTTTCAGAA ATCGGAAGCA TTCTTGTTAC AAAATTAGAT GGTTCAGCAA AAGGTGGTGG TGCGTTAAGT GCCGTTGCAG AAATCAATGC TCCAATTAAA TTTATCGGAA CTGGTGAAGG AGTCGACAAT TTAGAACAGT TTGATCCTAA AAAATTCATA TCCAGGATTC TTGGACTTGG GGACTTAGAC TCTCTTTTGG AGAAAACTGA AGACATAATG GACGAATCAA CGGAAGAAAG TATTGATTCA ATTTTAAAAG GTAAATTTAC ATTAATTGAG CTTTATGCAC AGCTTGAAAC CATATCAAAA ATGGGTCCAA TGAAACAGAT TTTAAGTATG ATTCCGGGAA TGGGCGGAAA CCTTCCAAAA GAAGCTGCAC AGTTAACTGA AGACAAGCTG AAAAGATACA AAATCATGAT GGACTCTATG ACACTGGAAG AAAAAGAAAA TCCTGAACTC ATAAAAACTT CAAGACTCCA GAGAATTGCA AAAGGAGCAG GGGTAAAACA GGATGAAATA AAGGATCTTT TGAAGTACTA TTCAACTACA AAAAATGCTT TTGGAAATTT GAAGCGTGGA AAAATGCCAA AAATGGGTGG ACAGATGGGC CAGATCATGA GGCAGTTAAT GTATAAAGAT TAA
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Protein sequence | MLDKLGQNLS DALNKIKNAT FVDKKLVKEV IKDIQKALIQ SDVNVKLVFN MSKEIERKAI EEAPPKGLSK KEHIVKIVYD ELVKLLGETT QKLELDPSKK SVILLIGIQG SGKTTSAAKL ARYIQKKGLR PGLIAADVYR PAAYQQLKQL SEKINVPLFG DETRTKTPVD ITKEGMEKLK KVDVIIIDTA GRHKEEESLL AEMKEMKDLT NPNEIILVID GTLGQQAKNQ AKAFKESVSE IGSILVTKLD GSAKGGGALS AVAEINAPIK FIGTGEGVDN LEQFDPKKFI SRILGLGDLD SLLEKTEDIM DESTEESIDS ILKGKFTLIE LYAQLETISK MGPMKQILSM IPGMGGNLPK EAAQLTEDKL KRYKIMMDSM TLEEKENPEL IKTSRLQRIA KGAGVKQDEI KDLLKYYSTT KNAFGNLKRG KMPKMGGQMG QIMRQLMYKD
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