Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0015 |
Symbol | |
ID | 4928065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 9406 |
End bp | 10113 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640165510 |
Product | tetrahydromethanopterin S-methyltransferase subunit D |
Protein accession | YP_001096547 |
Protein GI | 134045061 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4060] Tetrahydromethanopterin S-methyltransferase, subunit D |
TIGRFAM ID | [TIGR01112] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGCTA CAAGCTTTAT ATTACCTCTT GCGGAAATAA CCATTGCGGG AGCGATTATC AACGCAAGCG TTCACTTCGT TCCAGTAGGT GGTGCTCCAG CAGCGATGGC TACTTCAACA GGGGTAGGTA CAGGTACAAC ACAGTTAGCA GCAGGTGCAG GTTTTACCGG TCTCTTGGCT GCAGCTACAA TGGCTTCACA AGCGGGAGTT TCATTGGCTA ATCCAGTTCA CATGTTATTG ATCATGTTAT CTGGTGCTGT CGGTGCAATG ATCATGTTAG GCCTTACAAT GTTAATCGGT CAAATTATCT ATGTATACGG TATTGGTATC GTCCCTGCAG CAGATAAATG TGAAAAAGAC CCTATTACCG GAGATATTCA AAAACCATAC ATCACACCAG GTACAACAGG ACACGGTATT CCAACCGTTT GTTTCGTAAG TGGTACAATT GGTGCAGCAC TCGGTGGTCT CGGTGGTGCT CTTGCATACA TCGCACTCCA ACAGTTAGGA TTTGCCGCAG CTATTGCAGG TGTTTTGGCA GTAGGTTTCT TCTTTATGAA CGCGGTTTTA GCTTCATACA ACATTGGTGG TACAATCGAA GGATTCCACG ACCCTAAATT TAAGAAAATG CCAAACGGAG TTATTGCTTC ATTTGTTTCT TCATTAATCG CAGGTGCAGT ATTAATTGGA ATGGCTATGG GACTTTAA
|
Protein sequence | MDATSFILPL AEITIAGAII NASVHFVPVG GAPAAMATST GVGTGTTQLA AGAGFTGLLA AATMASQAGV SLANPVHMLL IMLSGAVGAM IMLGLTMLIG QIIYVYGIGI VPAADKCEKD PITGDIQKPY ITPGTTGHGI PTVCFVSGTI GAALGGLGGA LAYIALQQLG FAAAIAGVLA VGFFFMNAVL ASYNIGGTIE GFHDPKFKKM PNGVIASFVS SLIAGAVLIG MAMGL
|
| |