| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0008 |
|---|
| Symbol | |
|---|
| ID | 4928298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 4890 |
|---|
| End bp | 5426 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640165503 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001096540 |
|---|
| Protein GI | 134045054 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4010] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGG ATGCCAAGGG GATTGATAAA CAGTGGGTAA TATTAAATGA ACTGGCATCA
AAAGTTTCTA AAATTCGGCC ACTTCCTGAA GACGTTTATT CAAAACTCCG GATTGCAAAT
AATATAATTA CTTACTATTT ACTTGACGAA CACGCAGATT TTGAAGTTTT AAGAGACGCT
GAAAAGGAAA TATCGAAAAT ACAGGTGATC TTGTTTGGAT TAGCTGACCC TGATACTTCA
AAAGAATATT TGATCAAAAT GGGTCAGGCA TTAAGGAATG AGATTGATCT TGAATTTCCA
TTGAAACAGA CTTCATTTAA TACCGAAGTT AAAAGAAAGA AAGATTCTGA AACAATAAGA
ATAAATATGC CTGTAGAAGT TCATATTGAA GTTCTTGGGG AACTTAGCGA GCATAACGGA
GTAATATTTG AATTAAGTCA GGAAGACGAG AAAAAAGTTC TTATCGAAGG CGTAAAAGAA
AAAATAACTA CTACATTGAA AGATTTTTCT GTAATATGGA AATTTACGGA TAATTAA
|
|---|
| Protein sequence | MMKDAKGIDK QWVILNELAS KVSKIRPLPE DVYSKLRIAN NIITYYLLDE HADFEVLRDA
EKEISKIQVI LFGLADPDTS KEYLIKMGQA LRNEIDLEFP LKQTSFNTEV KRKKDSETIR
INMPVEVHIE VLGELSEHNG VIFELSQEDE KKVLIEGVKE KITTTLKDFS VIWKFTDN
|
|---|
| |