| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_R0110 |
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| Symbol | |
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| ID | 4923663 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4112494 |
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| End bp | 4115386 |
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| Gene Length | 2893 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640724480 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00834498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GGTTAAGTGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA
GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT
GGGGAAACCC GGCACCATAA GGTGTCATCA CTAAGTGAAT ACATAGCTTA GTGAGGCGAA
CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG
TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGCCTAGAGG GTGTTAGTGG AATGTGTTGG
AAAGCACAGC GATACAGGGT GATAGCCCCG TACATGAAAA CTAACTTTAG GTGAAAACGA
GTAGGACGGG ACACGTGATA TCTTGTTCGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT
ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG
AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA
CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CATTTTGTAG CGAGGTTAAG
CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGTGTAGA
CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA
CCGAACACAC GTATGTTGAA AAATGCGGTG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT
CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GAGCGAATAC
CATTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA
ACTCCGAATA CCAATGAGTA CTACTCGGGA GACACACGGC GGGTGCTAAC GTCCGTCGTG
AAAAGGGAAA CAACCCAGAC CATCAGCTAA GGTCCCAAAG TTATTGCTAA GTGGGAAACG
ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG
CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATA TAACGGGGCT AAGCAATACA
CCGAAGCTAT GGGTACTAGC GCTTGCGCTA GTGCGGTAGA GGAGCGTTCT GTAAGCCGTT
GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC
GATAAAGGGG GTGAAAAACC TCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC
GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACGGGT
TAATATTCCC GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG
CGTTGGTTGT CCGCGTTTAA GGCTGTAGGT AGGGTACTTA GGCAAATCCG GGCACCTAAT
ACTGAGAGTT GATGACGAGT CACTACGGTG ATGAAGTAGT TGATGCCATG CTTCCAGGAA
AATCTTCTAA GCTTCAGGTT AGTAGGAATC GTACCCCAAA CCGACACAGG TGGTCGGGTA
GAGAATACCA AGGCGCTTGA GAGAACTCGG CTGAAGGAAC TAGGCAAAAT GGTACCGTAA
CTTCGGGAGA AGGTACGCTC CTGTTGGTGA TGAGACTTGC TCTCTAAGCT GACGGGAGTC
GCAGATACCA GGTGGCTGCA ACTGTTTATC AAAAACACAG CACTGTGCAA AATCGCAAGA
TGACGTATAC GGTGTGACGC CTGCCCGGTG CCGGAAGGTT AATTGATTGG GTTATCTTCG
GAGAAGCTCA TGATCGAAGC CCCGGTAAAC GGCGGCCGTA ACTATAACGG TCCTAAGGTA
GCGAAATTCC TTGTCGGGTA AGTTCCGACC TGCACGAATG GCGTAATGAT GGCCACGCTG
TCTCCAGCCG AGACTCAGTG AAGTTGAAAT TGCGGTGAAG ATGCCGTATA CCCGCGGCTA
GACGGAAAGA CCCCGTGAAC CTTTACTATA GCTTGGCACT GAACATTGAC CCTACATGTG
TAGGATAGGT GGGAGACTTT GAAGCGGGAA CGCCAGTTCT CGTGGAGTCA TCCTTGAAAT
ACCACCCTTG TAGTGTTGAT GTTCTAACTC TGGCCCCTGA ATCGGGGTTG AGGACAGTGC
CTGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GCACGAAGGT
TGGCTAAGTA CGGTCGGACA TCGTACGGTT AGTGCAATGG CATAAGCCAG CTTAACTGCG
AGACATACAC GTCGAGCAGG TGCGAAAGCA GGTCATAGTG ATCCGGTGGT TCTGAATGGA
AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA
GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA
GTCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTCAGAAC
GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG ATGATTGAAG GGAGCTGCTC
CTAGTACGAG AGGACCGGAG TGGACGAACC GCTGGTGTTC GGGTTGTCAT GCCAATGGCA
TTGCCCGGTA GCTACGTTCG GAATCGATAA CCGCTGAAAG CATCTAAGCG GGAAGCGAGC
CCTAAGATGA GTCATCCCTA GACCTTTAAG GTCTCTAAAG AGCCGTCCGA GACTAGGACG
TTGATAGGCA GGGTGTGTAA GCGTTGTGAG GCGTTGAGCT AACCTGTACT AATGACTCGT
GAGGCTTAAC CAT
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| Protein sequence | |
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