Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_R0082 |
Symbol | |
ID | 4921194 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2751726 |
End bp | 2754618 |
Gene Length | 2893 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640724453 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTTAAGTGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT GGGGAAACCC GGCACCATAA GGTGTCATCA CTAAGTGAAT ACATAGCTTA GTGAGGCGAA CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGCCTAGAGG GTGTTAGTGG AATGTGTTGG AAAGCACAGC GATACAGGGT GATAGCCCCG TACATGAAAA CTAACTTTAG GTGAAAACGA GTAGGACGGG ACACGTGATA TCTTGTTCGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CATTTTGTAG CGAGGTTAAG CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGTGTAGA CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA CCGAACACAC GTATGTTGAA AAATGCGGTG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GAGCGAATAC CATTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA ACTCCGAATA CCAATGAGTA CTACTCGGGA GACACACGGC GGGTGCTAAC GTCCGTCGTG AAAAGGGAAA CAACCCAGAC CATCAGCTAA GGTCCCAAAG TTATTGCTAA GTGGGAAACG ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATA TAACGGGGCT AAGCAATACA CCGAAGCTAT GGGTACTAGC GCTTGCGCTG GTGCGGTAGA GGAGCGTTCT GTAAGCCGTT GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GATAAAGGGG GTGAAAAACC TCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACGGGT TAATATTCCC GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG CGTTGGTTGT CCGCGTTTAA GGCTGTAGGT AGGGTACTTA GGCAAATCCG GGTACCTAAT ACTGAGAGTT GATGACGAGT CACTACGGTG ATGAAGTAGT TGATGCCATG CTTCCAGGAA AATCTTCTAA GCTTCAGGTT AGTAGGAATC GTACCCCAAA CCGACACAGG TGGTCGGGTA GAGAATACCA AGGCGCTTGA GAGAACTCGG CTGAAGGAAC TAGGCAAAAT GGTACCGTAA CTTCGGGAGA AGGTACGCTC CTGTTGGTGA TGAGACTTGC TCTCTAAGCT GACGGGAGTC GCAGATACCA GGTGGCTGCA ACTGTTTATC AAAAACACAG CACTGTGCAA AATCGCAAGA TGACGTATAC GGTGTGACGC CTGCCCGGTG CCGGAAGGTT AATTGATTGG GTTATCTTCG GAGAAGCTCA TGATCGAAGC CCCGGTAAAC GGCGGCCGTA ACTATAACGG TCCTAAGGTA GCGAAATTCC TTGTCGGGTA AGTTCCGACC TGCACGAATG GCGTAATGAT GGCCACGCTG TCTCCAGCCG AGACTCAGTG AAGTTGAAAT TGCGGTGAAG ATGCCGTATA CCCGCGGCTA GACGGAAAGA CCCCGTGAAC CTTTACTATA GCTTGGCACT GAACATTGAC CCTACATGTG TAGGATAGGT GGGAGACTTT GAAGCGGGAA CGCCAGTTCT CGTGGAGTCA TCCTTGAAAT ACCACCCTTG TAGTGTTGAT GTTCTAACTC TGGCCCCTGA ATCGGGGTTG AGGACAGTGC CTGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GCACGAAGGT TGGCTAAGTA CGGTCGGACA TCGTACGGTT AGTGCAATGG CATAAGCCAG CTTAACTGCG AGACATACAC GTCGAGCAGG TGCGAAAGCA GGTCATAGTG ATCCGGTGGT TCTGAATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GTCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTCAGAAC GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG ATGATTGAAG GGAGCTGCTC CTAGTACGAG AGGACCGGAG TGGACGAACC GCTGGTGTTC GGGTTGTCAT GCCAATGGCA TTGCCCGGTA GCTACGTTCG GAATCGATAA CCGCTGAAAG CATCTAAGCG GGAAGCGAGC CCTAAGATGA GTCATCCCTA GACCTTTAAG GTCTCTAAAG AGCCGTCCGA GACTAGGACG TTGATAGGCA GGGTGTGTAA GCGTTGTGAG GCGTTGAGCT AACCTGTACT AATGACTCGT GAGGCTTAAC CAT
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Protein sequence | |
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