| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_R0009 |
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| Symbol | |
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| ID | 4922376 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 203400 |
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| End bp | 204956 |
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| Gene Length | 1557 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 640724380 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000155519 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.051604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATTGAAGAG TTTGATCATG GCTCAGATTG AACGCTGGCG GCAGGCCTAA CACATGCAAG
TCGAGCGGTA ACATTTCAAA AGCTTGCTTT TGAAGATGAC GAGCGGCGGA CGGGTGAGTA
ATGCCTAGGG AACTGCCCAG TCGAGGGGGA TAACAGTTGG AAACGACTGC TAATACCGCA
TACGCCCTAC GGGGGAAAAG AGGGGATCTT CGGACCTTCT GCGATTGGAT GTACCTAGGT
GGGATTAGCT AGTAGGTGAG GTAATGGCTC ACCTAGGCGA CGATCCCTAG CTGTTCTGAG
AGGATGATCA GCCACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG
GGGAATATTG CACAATGGGC GCAAGCCTGA TGCAGCCATG CCGCGTGTGT GAAGAAGGCC
TTCGGGTTGT AAAGCACTTT CAGCGAGGAG GAAAGGTTAA CGGTTAATAC CCGTTAGCTG
TGACGTTACT CGCAGAAGAA GCACCGGCTA ACTTCGTGCC AGCAGCCGCG GTAATACGAG
GGGTGCAAGC GTTAATCGGA ATTACTGGGC GTAAAGCGTA CGCAGGCGGT TGATTAAGCG
AGATGTGAAA GCCCCGGGCT TAACCTGGGA ACTGCATTTC GAACTGGTCA ACTAGAGTCT
TGTAGAGGGG GGTAGAATTT CAGGTGTAGC GGTGAAATGC GTAGAGATCT GAAGGAATAC
CGGTGGCGAA GGCGGCCCCC TGGACAAAGA CTGACGCTCA GGTACGAAAG CGTGGGGAGC
AAACAGGATT AGATACCCTG GTAGTCCACG CCGTAAACGA TGTCTACTCG GAATTTGGTG
TCTTGAACAC TGGGTTCTCA AGCTAACGCA TTAAGTAGAC CGCCTGGGGA GTACGGCCGC
AAGGTTAAAA CTCAAATGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA TGTGGTTTAA
TTCGATGCAA CGCGAAGAAC CTTACCTACT CTTGACATCC AGAGAACTTT TCAGAGATGA
ATTGGTGCCT TCGGGAACTC TGAGACAGGT GCTGCATGGC TGTCGTCAGC TCGTGTTGTG
AAATGTTGGG TTAAGTCCCG CAACGAGCGC AACCCTTATC CTTACTTGCC AGCGGGTAAT
GCCGGGAACT TTAGGGAGAC TGCCGGTGAT AAACCGGAGG AAGGTGGGGA CGACGTCAAG
TCATCATGGC CCTTACGAGT AGGGCTACAC ACGTGCTACA ATGGTCGGTA CAGAGGGTTG
CGAAGCCGCG AGGTGGAGCT AATCTCACAA AGCCGGTCGT AGTCCGGATT GGAGTCTGCA
ACTCGACTCC ATGAAGTCGG AATCGCTAGT AATCGTGGAT CAGAATGCCA CGGTGAATAC
GTTCCCGGGC CTTGTACACA CCGCCCGTCA CACCATGGGA GTGGGCTGCA CCAGAAGTAG
ATAGCTTAAC CTTCGGGAGG GCGTTTACCA CGGTGTGGTT CATGACTGGG GTGAAGTCGT
AACAAGGTAG CCCTAGGGGA ACCTGGGGCT GGATCACCTC CTTACCTATA CGATTGA
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| Protein sequence | |
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