| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_R0001 |
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| Symbol | |
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| ID | 4923932 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 151087 |
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| End bp | 152641 |
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| Gene Length | 1555 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640724372 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00717512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.153342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATTGAAGAG TTTGATCATG GCTCAGATTG AACGCTGGCG GCAGGCCTAA CACATGCAAG
TCGAGCGGTA ACAGAAAGTA GCTTGCTACT TTGCTGACGA GCGGCGGACG GGTGAGTAAT
GCCTAGGGAA CTGCCCAGTC GAGGGGGATA ACAGTTGGAA ACGACTGCTA ATACCGCATA
CGCCCTACGG GGGAAAAGAG GGGATCTTCG GACCTTCTGC GATTGGATGT ACCTAGGTGG
GATTAGCTAG TAGGTGAGGT AATGGCTCAC CTAGGCGACG ATCCCTAGCT GTTCTGAGAG
GATGATCAGC CACACTGGGA CTGAGACACG GCCCAGACTC CTACGGGAGG CAGCAGTGGG
GAATATTGCA CAATGGGCGC AAGCCTGATG CAGCCATGCC GCGTGTGTGA AGAAGGCCTT
CGGGTTGTAA AGCACTTTCA GCGAGGAGGA AAGGTTAACG GTTAATACCC GTTAGCTGTG
ACGTTACTCG CAGAAGAAGC ACCGGCTAAC TTCGTGCCAG CAGCCGCGGT AATACGAGGG
GTGCAAGCGT TAATCGGAAT TACTGGGCGT AAAGCGTACG CAGGCGGTTG ATTAAGCGAG
ATGTGAAAGC CCCGGGCTTA ACCTGGGAAC TGCATTTCGA ACTGGTCAAC TAGAGTCTTG
TAGAGGGGGG TAGAATTTCA GGTGTAGCGG TGAAATGCGT AGAGATCTGA AGGAATACCG
GTGGCGAAGG CGGCCCCCTG GACAAAGACT GACGCTCAGG TACGAAAGCG TGGGGAGCAA
ACAGGATTAG ATACCCTGGT AGTCCACGCC GTAAACGATG TCTACTCGGA ATTTGGTGTC
TTGAACACTG GGTTCTCAAG CTAACGCATT AAGTAGACCG CCTGGGGAGT ACGGCCGCAA
GGTTAAAACT CAAATGAATT GACGGGGGCC CGCACAAGCG GTGGAGCATG TGGTTTAATT
CGATGCAACG CGAAGAACCT TACCTACTCT TGACATCCAG AGAACTTTTC AGAGATGAAT
TGGTGCCTTC GGGAACTCTG AGACAGGTGC TGCATGGCTG TCGTCAGCTC GTGTTGTGAA
ATGTTGGGTT AAGTCCCGCA ACGAGCGCAA CCCTTATCCT TACTTGCCAG CGGGTAATGC
CGGGAACTTT AGGGAGACTG CCGGTGATAA ACCGGAGGAA GGTGGGGACG ACGTCAAGTC
ATCATGGCCC TTACGAGTAG GGCTACACAC GTGCTACAAT GGTCGGTACA GAGGGTTGCG
AAGCCGCGAG GTGGAGCTAA TCTCACAAAG CCGGTCGTAG TCCGGATTGG AGTCTGCAAC
TCGACTCCAT GAAGTCGGAA TCGCTAGTAA TCGTGGATCA GAATGCCACG GTGAATACGT
TCCCGGGCCT TGTACACACC GCCCGTCACA CCATGGGAGT GGGCTGCACC AGAAGTAGAT
AGCTTAACCT TCGGGAGGGC GTTTACCACG GTGTGGTTCA TGACTGGGGT GAAGTCGTAA
CAAGGTAGCC CTAGGGGAAC CTGGGGCTGG ATCACCTCCT TACCTATACG ATTGA
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| Protein sequence | |
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