Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3867 |
Symbol | |
ID | 4923991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4601532 |
End bp | 4601786 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640165493 |
Product | hypothetical protein |
Protein accession | YP_001095989 |
Protein GI | 127514792 |
COG category | [S] Function unknown |
COG ID | [COG0759] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000433459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000248153 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCGCAAG CTCAGTCGCC GTTACAATGG CTAGCCACTA AGCTGATCCG AGGCTACCAA ATCTTTATCA GCCCTATACT GGGGCCAAAG TGCCGTTTTC ACCCCACATG TTCCAATTAC GCGCTCGAAG CGATTCGATT GCACGGATTT GTGAAAGGGA GTTGGTTTGC AGGGAAACGC GTATTAAAAT GTCACCCTTT ACATCCGGGC GGTGAAGATC CCGTCCCTCC AAAAAATAAC AGGTGTAATA AATAG
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Protein sequence | MAQAQSPLQW LATKLIRGYQ IFISPILGPK CRFHPTCSNY ALEAIRLHGF VKGSWFAGKR VLKCHPLHPG GEDPVPPKNN RCNK
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