| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3860 |
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| Symbol | |
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| ID | 4924024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4590736 |
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| End bp | 4591377 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165486 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001095982 |
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| Protein GI | 127514785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000283394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATAGATC TGGCACTGCT TCCCCTCTAT TTAACCACGG TAATCGCCCT ACTCCTGATC
CCCGGGCCCG ATATGTTACT CATCGCCAGT TCGAGTCTTA GCTATGGCAA GAAGGTAGGC
GTCTATGCCA GCTTCGGTAA TGCCACCTCG GGTTTGATCT TGACCCTGCT GGCGGCGATG
GGGGTATCGG CGCTGATCGC CCTCAATCCA ATTGCACTTG AAGTATTAAG GATCGCCGGT
GGTCTCTACC TGCTGAAGAT GGGCTGGGAC TGTATGCGCG CCACACCGAG TCAGGCGCCG
GAGATCGCCG GGCAGAAAAA ATTAGCCAGG CAGCTCTATC GCCGCGCGGT GATCAGTAAC
CTGTTAAACC CTAAGGCGCT GATCTTCTTC GTGCTTTTCT TGCCCCAATT TGTCTCCAGT
CAACTGACTG CCAGCTCGGC CGAGCAGATG CTGGCCCTGG GGCTAGTGCT CAACATCATG
GGGCTAAGTT TTAATCTCTT GCTGGTGGCT CTGGTTGGCA GTCTGGGCAA GAATCTACTC
GACAACGAGA AGTTCAGAAC CAATCAGAAC AAGTTCATGG GCCTGATCTT CTTCCTGTTG
GCCATCTGGC TGCTAGCCTC CCAGCTCCAA AGCGTGGGCT AA
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| Protein sequence | MIDLALLPLY LTTVIALLLI PGPDMLLIAS SSLSYGKKVG VYASFGNATS GLILTLLAAM
GVSALIALNP IALEVLRIAG GLYLLKMGWD CMRATPSQAP EIAGQKKLAR QLYRRAVISN
LLNPKALIFF VLFLPQFVSS QLTASSAEQM LALGLVLNIM GLSFNLLLVA LVGSLGKNLL
DNEKFRTNQN KFMGLIFFLL AIWLLASQLQ SVG
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