| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3858 |
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| Symbol | |
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| ID | 4924022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4588736 |
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| End bp | 4589518 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165484 |
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| Product | ubiquinone biosynthesis O-methyltransferase |
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| Protein accession | YP_001095980 |
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| Protein GI | 127514783 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000301378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTTAGACA AAAGCCGACT GAGCCGCTTC AAGACCCAGA TAGATAGCCA AACAGAGATC
GCCAAGTTCG ACGCACTGGC CAAGGAGTGG CGCGATCCCC ACGGCAAGTT TAAGCATGTG
CTCAGTTTCA ATCAGACCCG GCTCACGGCC ATAGAAGATC AGATCGCCAG CCATTTTGGA
CGCGATCTCA CCCAGGATAT CCCCTTCGAT GGGCTGTCGT TATTGGACAT AGGCTGCGGC
GTCGGCCTGC TGTGCGAACC CTTGGCCAGC CAGGGTGCCC GGGTAACGGG CATAGACGCC
AGCGAACATA ACATCACCCT GGCACACCGC CACGCTAACA GCTGGTCAAT CCCCATAGAG
TATCGCCATT GCTTGGCAGG CGATCTTCCA AGGGAGCAGC CTCAATATGA TGTGATCTTA
AATACCGAGG TGATCGAACA TGTCGAGGAT CAGGCGGCGC TGGTGGCCTC CTGTTGTGAC
CTGTTAAAGC CAGGCGGTCT CATGGTGATG GCAACCCTCA ATCGCACCCT GAGATCCTAT
CTCATCGGCA TAATAGGCGC CGAGTACATC ATGCGCTACC TCCCCACAGG CACCCACGAC
TGGCACCACT TCGTTACCCC CCAAGAGCTG GACGAGATGC TCACTCCCCA CGGATTATCG
ACCAAAGGGG TCGAGGGCAT GGCCTTTAAT CCCTTCACCC GCCGCTGGAA GATCACCAGC
AATTCGGCGG TCAACTATCT ACTCTACGCC AGTAAGCCTA TACCTGGGGT TTTAGAGGCC
TAA
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| Protein sequence | MLDKSRLSRF KTQIDSQTEI AKFDALAKEW RDPHGKFKHV LSFNQTRLTA IEDQIASHFG
RDLTQDIPFD GLSLLDIGCG VGLLCEPLAS QGARVTGIDA SEHNITLAHR HANSWSIPIE
YRHCLAGDLP REQPQYDVIL NTEVIEHVED QAALVASCCD LLKPGGLMVM ATLNRTLRSY
LIGIIGAEYI MRYLPTGTHD WHHFVTPQEL DEMLTPHGLS TKGVEGMAFN PFTRRWKITS
NSAVNYLLYA SKPIPGVLEA
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