| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3851 |
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| Symbol | |
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| ID | 4924015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4581868 |
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| End bp | 4582662 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640165477 |
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| Product | F0F1 ATP synthase subunit A |
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| Protein accession | YP_001095973 |
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| Protein GI | 127514776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000751121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000272829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCAA CTGGTGAAGC GTTAACACCG CAGGGCTATA TCCAGCACCA CCTTACCAAC
TTACACGTTG GTGAAGGCTT CTGGACATGG CACATTGATT CGTTGTTCTT TTCGGTTGGG
CTTGGTGTTC TATTCTTGTG GCTATTCCGT AGCGTTGGCA AGAAGGCAAC GACAGGTGTT
CCCGGTAAGC TTCAATGCTT TATCGAGATG ATCGTTGAAT TCGTCGATGG CAGCGTGAAG
GAAACCTTCC ATGGCCGCAA TCCTGTTATT GCTCCGTTGG CATTAACGAT TTTTGTGTGG
GTATTCATGA TGAACTTCAT GGATATGATT CCAGTTGATT GGCTGCCTTG GGCTGCTGGC
CTGGCCGGGA TCACTCACCT GAAAGTCGTA CCAACTACCG ACCTAAACAT CACCTTCAGC
TTAGCTCTGG GTGTGTTTGT GCTGATTATC TACTACAGCA TCAAGGTCAA GGGCGTTTCA
GGCTTTGTTA AAGAACTGAC ATTACAGCCT TTTAACCATA AGGCAATGAT ACCCGTCAAC
CTCCTATTAG AGTCGGTTAC CCTGATCGCT AAGCCTATTT CATTGGCATT GCGTCTGTTC
GGTAACTTGT ACGCAGGTGA GTTGATCTTC ATCCTTATTG CGCTGATGTA TGGTGCTAAC
TTGGCGTTAT CTGCCCTAGG TGTGACTCTA CAACTAGGTT GGTTAATCTT CCATATTTTG
GTTATCACTC TGCAGGCGTT TATCTTCATG ATGCTGACGA TCGTGTATCT CAGCATGGCA
CATGAAGATC ATTAA
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| Protein sequence | MAATGEALTP QGYIQHHLTN LHVGEGFWTW HIDSLFFSVG LGVLFLWLFR SVGKKATTGV
PGKLQCFIEM IVEFVDGSVK ETFHGRNPVI APLALTIFVW VFMMNFMDMI PVDWLPWAAG
LAGITHLKVV PTTDLNITFS LALGVFVLII YYSIKVKGVS GFVKELTLQP FNHKAMIPVN
LLLESVTLIA KPISLALRLF GNLYAGELIF ILIALMYGAN LALSALGVTL QLGWLIFHIL
VITLQAFIFM MLTIVYLSMA HEDH
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