| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3848 |
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| Symbol | |
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| ID | 4924012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4580490 |
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| End bp | 4581023 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640165474 |
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| Product | F0F1 ATP synthase subunit delta |
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| Protein accession | YP_001095970 |
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| Protein GI | 127514773 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000255174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAGCACCAT CGCTCGTCCT TACGCAAAGG CAGCATTTGA CTTTGCTATT
GAGAAAAATG CAGTAGAAAG CTGGGCTGAA ATGCTTAGCT TTGCCGCTCA AGTCAGTGAA
AACGAGACGA TGAAGCCGCT GCTGTCTGGT GCGCTTTCGA GCAGCCAGCT TGCCGACCTT
TTCATTAAGG TGTGTGGTGA GCAGATCAAT GAGCAAGGTC AAAATCTGAT AAAGGTAATG
GCTGAAAACG GTCGTTTGGA AGTACTTCCT GCTGTATATG AACTCTTTCA TGAGTTCAGC
AACGAGTGGG CGAAAGAGGT TGAAGCATCT GTTGTTTCTG CCACTGAGCT TAGCGCAGAG
CAACAGCAAC AAATTAGTGC TTCTCTAGAA AAACGTCTCA CACGCAAAGT TAAGCTGAAT
TGCAGCGTAG ATGCCAGCCT GGTGGCTGGT GTAATCATCA CGGCAGGTGA CCTGGTCATA
GATGGCTCGG TCAGCGGTAA ACTAAACCGC CTGTCTGAAA AGCTGCAGTC GTAA
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| Protein sequence | MAELSTIARP YAKAAFDFAI EKNAVESWAE MLSFAAQVSE NETMKPLLSG ALSSSQLADL
FIKVCGEQIN EQGQNLIKVM AENGRLEVLP AVYELFHEFS NEWAKEVEAS VVSATELSAE
QQQQISASLE KRLTRKVKLN CSVDASLVAG VIITAGDLVI DGSVSGKLNR LSEKLQS
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