| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3847 |
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| Symbol | |
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| ID | 4924011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4578934 |
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| End bp | 4580475 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640165473 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001095969 |
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| Protein GI | 127514772 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000253234 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAAC AGCGGATCGA GCAGTTCGAA
GTCGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTTGCAG TGAGCGACGG CATTATTCGC
GTTCACGGCC TTGCCGATGT AATGCAAGGT GAGATGATCG AACTGCCTGG TAACCGTTAT
GCGATCGCGT TGAACTTAGA ACGTGATTCT GTCGGTGCCG TAGTTATGGG TCCTTATGCC
GATCTGGCAG AAGGCCAAAA AGTTAAGACA ACTGGTCGTA TCTTGGAAGT GCCTGTTGGC
CGTGGTCTAC TTGGCCGCGT AGTTAACACT CTGGGCCAAC CAATCGACGG TAAAGGACCT
ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATCGCAC CAGGCGTTAT TGAACGTAAG
TCGGTTGATC AGCCAGTACA GACTGGTTAT AAAGCCGTTG ACTCTATGAT CCCAATCGGT
CGTGGTCAGC GTGAGCTGGT CATCGGTGAC CGTCAGACTG GTAAGACAGC ACTGGCGATC
GATGCCATCA TCAACCAAAA AGATTCAGGC ATTAAGTGTG TATACGTAGC AGTAGGCCAG
AAGGCTTCTA CCATTGCTAA CGTGGTACGC AAACTTGAAG AACACGGCGC ACTGGCTAAC
ACAGTGGTTG TTGTGGCAAC AGCTTCTGAA GCTGCGGCGC TACAATACCT GGCTCCGTAC
TCAGGTTGTT CAATGGGTGA ATACTTCCGT GACCGTGGTG AAGATGCACT GATCGTATAT
GATGATCTTT CTAAGCAAGC TGTTGCTTAC CGTCAGATCT CATTGCTACT GAAGCGTCCA
CCAGGACGTG AAGCATACCC AGGTGATGTT TTCTATCTTC ACTCTCGTCT ACTTGAACGT
GCTTCACGCG TTAACGCTGA GTACGTTGAG AAGTTCACTA ATGGCGAAGT TAAGGGCCAA
ACTGGTTCTT TGACTGCACT GCCTATTATT GAAACTCAAG CGGGTGACGT ATCTGCATTC
GTACCGACCA ACGTAATTTC GATTACCGAT GGTCAGATCT TCCTTGAAAC TGACCTGTTT
AACTCAGGCC TACGTCCTGC GGTTAACCCA GGTATTTCGG TTTCTCGCGT TGGTGGTGCG
GCTCAGACTA AGATCATCAA GAAACTGTCT GGCGGTATCC GTACTGCACT TGCACAGTAT
CGAGAGCTTG CAGCGTTCTC TCAGTTTGCA TCTGACCTTG ACGATGCAAC TCGTGCTCAG
CTTGAGCATG GTGAGCGTGT TACCGAACTC ATGAAGCAGA AGCAATACGC GCCAATGAGC
GTGGCCGACC AGTCTGTGTC TATTTTCGCA GCTGAAAAAG GTTACCTAAA AGGCGTTGAG
CTGAACAAGA TCGGTGATTT CGAAGCTTCT TTGCTCTCTT ACATGAACAG CGAGCATGCT
GACCTAATGA AGACTATCAA CGAGACTGGC GACTACAATG CCGATATCGA AGGTGGTTTG
AAGGCTGGCC TCGACAAGTT CGTAGAAACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSEARNEGT IVAVSDGIIR VHGLADVMQG EMIELPGNRY
AIALNLERDS VGAVVMGPYA DLAEGQKVKT TGRILEVPVG RGLLGRVVNT LGQPIDGKGP
IDNDGFSPVE VIAPGVIERK SVDQPVQTGY KAVDSMIPIG RGQRELVIGD RQTGKTALAI
DAIINQKDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TVVVVATASE AAALQYLAPY
SGCSMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNAEYVE KFTNGEVKGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGERVTEL MKQKQYAPMS VADQSVSIFA AEKGYLKGVE LNKIGDFEAS LLSYMNSEHA
DLMKTINETG DYNADIEGGL KAGLDKFVET QTW
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