| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3839 |
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| Symbol | |
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| ID | 4924243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4569026 |
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| End bp | 4570855 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165465 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_001095961 |
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| Protein GI | 127514764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000251004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCGGAA TCGTTGGCGC AGTGGCGCAA AGGGATGTTG CGGAAATTCT ACTCGAGGGG
CTACGCCGCC TCGAATATCG TGGTTATGAC TCTGCCGGTG TGGCGGTGAT TCATAACAAT
GAACTGGCAA GCACTCGCCG TGTAGGAAAG GTGCAAGAGC TGTCTAGTGC CTTAGAGCAG
GCACCACTTG TCGGTGGCAC GGGCATCGCA CATACGCGCT GGGCGACCCA TGGCGAGCCG
AGTGAGCGTA ACGCTCACCC TCATCAGTCT AGCGGTGATA TTGCCGTGGT GCACAACGGC
ATCATCGAAA ACCACAACAA GCTACGCGAC ATGCTGAAGG GCCTGGGTTA CACCTTTAAC
TCAGATACTG ATACCGAAGT GATCTGCCAC CTGGTACACC ATGAGCTTAA GTCTCATGGC
ACTCTGCTTG GCGCTGTGCA GGCCACGGTC AAACAACTCG AAGGCGCCTA CGGCACGGTT
GTTATCGACC GTCGTGACAG CGAGCGCATG ATAGTCGCCC GCTCAGGTAG CCCACTGGTG
ATAGGTTTCG GCCTGGGCGA AAACTTCGTC GCCTCGGATC AGCTGGCACT GCTGCCCGTG
ACTCGCTCTT TTGCCTTCCT CGAAGAGGGA GATGTGGCCG AGGTAACCCG TCGCACCGTG
AGTATCTTCG ATGTCGATGG CAACGCGGTC GAGCGTGAAG TGAAAGAGTC AGAAGTGACT
CATGATGCGG GTGACAAGGG CGAGTACCGC CACTATATGC TCAAGGAGAT CTATGAGCAG
CCTCGCGCTA TCGCTCATAC TCTGGAGGGA CGCATTGCCG GTGGCCATGT GCTGGATTCT
GCCTTCGGTG AAAACGCGGC AGAGTTCCTA AAAGATATCA AACACGTGCA GATCATCGCC
TGTGGTACCA GCTATCACGC GGGTATGGCG GCACGTTACT GGCTTGAGGA TTGGGCTGGG
GTTTCCTGTA ACGTCGAGAT CGCCTCTGAG TTCCGTTACC GAAAATCGCA CCTGTTCCCC
AATAGCCTGT TGGTGACCAT CTCTCAGTCG GGCGAAACCG CCGATACCCT GGCCGCGCTG
CGTCTGGCCA AAGAGATGGG CTACAAGGCG ACCCTGACTA TCTGTAATGC GCCAGGTTCT
TCTCTGGTGC GCGAGTCGGA CATGGCGTAC ATGATGAAGG CGGGCGCCGA GATCGGCGTA
GCTTCAACCA AGGCCTTTAC CGTACAGCTG GCAGGTCTCT TGATGTTGAC CGCCGCTGTC
GGTCGTCACA ACGGCATGTC CCCCGAGATG TTGGCCGAGA TCACCCAGAG TCTGCAGTCT
ATGCCGGCTA AGGTGGAACA GGCATTGGGT CTGGATGATG CTATCGCCGA GTTGGCCGAA
GACTTTGCCG ATAAGCATCA CGCTCTGTTC CTGGGCCGCG GCGATCAATA TCCTATCGCG
ATGGAAGGTG CGCTCAAGCT TAAGGAGATC TCTTACATCC ACGCCGAAGC TTATGCATCT
GGTGAGCTTA AGCACGGTCC GCTGGCACTG ATCGATGCTG ATATGCCGGT GATCGTTGTG
GCGCCAAACA ACGAACTGCT TGAAAAGCTC AAGTCGAACG TCGAAGAGGT GCGTGCCCGT
GGTGGCCTCA TGTATGTGTT TGCCGACAAG GACGCCGAGT TCGAGTCAGA TGACACCATG
AAGGTGATCC CAGTGCCACA CTGTGATGAC TACATGGCGC CGCTCATCTA CACTATCCCG
TTACAGCTGC TCTCTTATCA TGTCGCCCTG ATCAAGGGGA CTGACGTGGA TCAGCCGCGT
AACCTGGCTA AGTCGGTGAC GGTAGAGTAA
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| Protein sequence | MCGIVGAVAQ RDVAEILLEG LRRLEYRGYD SAGVAVIHNN ELASTRRVGK VQELSSALEQ
APLVGGTGIA HTRWATHGEP SERNAHPHQS SGDIAVVHNG IIENHNKLRD MLKGLGYTFN
SDTDTEVICH LVHHELKSHG TLLGAVQATV KQLEGAYGTV VIDRRDSERM IVARSGSPLV
IGFGLGENFV ASDQLALLPV TRSFAFLEEG DVAEVTRRTV SIFDVDGNAV EREVKESEVT
HDAGDKGEYR HYMLKEIYEQ PRAIAHTLEG RIAGGHVLDS AFGENAAEFL KDIKHVQIIA
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAL
RLAKEMGYKA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAAV
GRHNGMSPEM LAEITQSLQS MPAKVEQALG LDDAIAELAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADK DAEFESDDTM KVIPVPHCDD YMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE
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