Gene Shew_3837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3837 
Symbol 
ID4924241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4566210 
End bp4566530 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content45% 
IMG OID640165463 
Producthypothetical protein 
Protein accessionYP_001095959 
Protein GI127514762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000184375 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA GACTCACTCT TCAAGAATGG CATACCCTAT TCGATCAATA CGAATCCAGT 
CATCTGTCTC AACGCGTGTT CTGTGAACAA AATGGGCTGA GCCTTTCAAC CTTCCATGCC
AAGCGACAGC AACTAAAGTT CATAGAGCAA CCTAAGAGTA GTGGATTCGT TAAAGCTGAA
GTCGTTGAAA AAACGACACG CTATCAGATG ACCCAAACAC CGATTGCCAA CATGACACTA
TTGATTAATG ACGTTGAACT CAGCATCCCC CAGGGAACAC CTGCCTCGTT TCTGGCAGAG
TTAATCGGAG CACTGTCATG A
 
Protein sequence
MAKRLTLQEW HTLFDQYESS HLSQRVFCEQ NGLSLSTFHA KRQQLKFIEQ PKSSGFVKAE 
VVEKTTRYQM TQTPIANMTL LINDVELSIP QGTPASFLAE LIGALS