| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3832 |
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| Symbol | |
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| ID | 4923850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4562232 |
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| End bp | 4564238 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640165460 |
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| Product | putative hydrolase |
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| Protein accession | YP_001095956 |
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| Protein GI | 127514759 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00137026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACGA CTCGTATACT CGCGTATTCG GCGCTACTTT CCATGATGGC CGCATCGCAA
GCCGTTATGG CTTATGATTT CAACACAAAA ACCAAAGAAG CCACCTCGTT TACCAAACAG
GCCAATGAAA AAGTTTATCA AGAATTGAAT TTCGACGATA AAACCGCTTT TGCAGATGCT
GACCGTGGTT TTATTGCCCC GCTGTTGAAT GATGGCAATA TCGACGGTGT ATTTAACGCG
ACCGCAATGA ACTACATGCA GGATAAGAAG TCACCAGATT CAGTTAACCC GAGCTTGTGG
CGTCATGCTC AATTGGTTAA CCGCGGCGGC CTGTATCAGG TCAGTGAGCA TATCTATCAG
GTTCGTGGTC AAGATTTGTC AAACCTGACT ATCATAGAAA CAGACAATGG TGTGGTTTTC
TATGATGTAG AGTATTCGGG TAAAGCACTT AATGCGTCTA TCGCGCTTTA CGAAAAACAC
CGAGGCAAGC GTGCACTCAA AGGTGTGATC ATGTCGCACA GCCATGCCGA TCATTTTGGG
GGGTTTGAAG GCATTTATGC TGCTGGTCTT GCTACGCCAG AAGATGTCCA GAGTGGTAAG
TTACCAGTCA TTGCGCCCGT GGGATTCGTT GAAGAAGCGG TGAGTGAGAA CGTGATGGGT
GGCAACATCA TGGCTCGTCG CGCAGGTTAT CAATATGGTA ATGTGCTTAA AGTGAATGAT
AAAGGTATTG TGACTGGTGC ACTCGGCCCC GCATTGGCCA ATGATGAGTC ATCTCTGCCC
ATACCCAATC ACTTTATTGA AAAGGATGGT GAAATCGTCA AAATTGACGG TGTGGATTTT
GAATTTTACC TAGTACCACA TACCGAGGCT CCAGCAGAAA TGGTCATGTT TATTCCGAAA
TGGAATGCAA TGTCCTTGGC TGAAGACTTG AATCATTTGC AACACAATAT CTATACGCTG
CGTGGAGCTC AGATCCGCGA TTCAGCAGCT TGGGCCAAAT ACTTGAATCA AGCGATTGGC
CGTTGGGGTG ATAAGGTGGA AGTGCAATTT GGGCCGCACA CTTGGCCTGT ATGGGGTAAT
GACAAAGTCG TTGAGTACAT GAAAGACCAG CGCGACTTGT ATCAGTCGCT TTACGACACC
ACAATGCGTT ATGCCAACTA CGGCTATGGT CCCGATGAAA TTGCAGAAAA TGCTAAGTTA
CCTGAATCTG TGTTCAATAA ATGGGATAAC CGTCCATACT ACGGCAATCT AAAGAACAAC
TTGAAATCAA CTTATATCCG CAACCTAGGT TGGTTTGATG GTAACGCCGC TAAATTGGCA
ACTTACCCAG ATGCGGAGCG TGGCGAACGC TACGTCGAGG CATTTGGTGG AGAGCAGAAA
GTCATTGATG CTGCTCTGAA CAGTTTCAAC AAAGGTGACT ACCGTTTCGC CACCGAGTTG
CTGAACAACG TCGTTGCGTC GAATCCAGAG AATAAGCAAG CGACATTCTT GATGGCCGAC
GCGCTTGAGC AATTGGGCTA TCAGGATGAA ACTACGCTGA CTCGAAATCT CTACTTGTCA
GGTGCACAGG AGCTACGTAT GGGTGGTAAC GTACCGAACA ACCTATCGAC GGCTTCACCA
GAAGTTATTG CCGCTCTGTC AGGGGATATG CTGATGCCTT ATTTGGGCAT GATTATTGAC
CAAGTCAAAG CTGAGAAAGT GGGTAATTAT GTCATTAACC TAAACTTGGC TGATGACAAA
CAATTTACTG TCGATCTGCA CAACGGGGTA TTCAATACTC TAGACGTCAC AGCCAAGAAC
GCTGACGTCA CACTGGATAT CAGTAAGCCG GATCTGTTAA CTTTCCTTGC AGGTAAAATA
TCAATGAACG ACCTGATGAA ATCAAATAAG GTCAAGGTTG ATGGTGATGC CAAGGTATTA
GATCATTTGC CCGGTTTGTT CGACTTAAAC ATTAAGAACG ACATGAACCT CGTTCTTCCC
CTACAAGCAG ACCATCGGAT CAAGTAA
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| Protein sequence | MKTTRILAYS ALLSMMAASQ AVMAYDFNTK TKEATSFTKQ ANEKVYQELN FDDKTAFADA
DRGFIAPLLN DGNIDGVFNA TAMNYMQDKK SPDSVNPSLW RHAQLVNRGG LYQVSEHIYQ
VRGQDLSNLT IIETDNGVVF YDVEYSGKAL NASIALYEKH RGKRALKGVI MSHSHADHFG
GFEGIYAAGL ATPEDVQSGK LPVIAPVGFV EEAVSENVMG GNIMARRAGY QYGNVLKVND
KGIVTGALGP ALANDESSLP IPNHFIEKDG EIVKIDGVDF EFYLVPHTEA PAEMVMFIPK
WNAMSLAEDL NHLQHNIYTL RGAQIRDSAA WAKYLNQAIG RWGDKVEVQF GPHTWPVWGN
DKVVEYMKDQ RDLYQSLYDT TMRYANYGYG PDEIAENAKL PESVFNKWDN RPYYGNLKNN
LKSTYIRNLG WFDGNAAKLA TYPDAERGER YVEAFGGEQK VIDAALNSFN KGDYRFATEL
LNNVVASNPE NKQATFLMAD ALEQLGYQDE TTLTRNLYLS GAQELRMGGN VPNNLSTASP
EVIAALSGDM LMPYLGMIID QVKAEKVGNY VINLNLADDK QFTVDLHNGV FNTLDVTAKN
ADVTLDISKP DLLTFLAGKI SMNDLMKSNK VKVDGDAKVL DHLPGLFDLN IKNDMNLVLP
LQADHRIK
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